KEGG   Agrobacterium radiobacter: Arad_2991Help
Entry
Arad_2991         CDS       T00850                                 

Gene name
ddlB
Definition
(GenBank) D-alanine-D-alanine ligase protein
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
ara  Agrobacterium radiobacter
Pathway
ara00473  D-Alanine metabolism
ara00550  Peptidoglycan biosynthesis
ara01100  Metabolic pathways
ara01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:ara00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    Arad_2991 (ddlB)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Arad_2991 (ddlB)
 09160 Human Diseases
  09175 Drug resistance: Antimicrobial
   01502 Vancomycin resistance
    Arad_2991 (ddlB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ara01011]
    Arad_2991 (ddlB)
Enzymes [BR:ara01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     Arad_2991 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:ara01011]
 Precursor biosynthesis
  Amino acid ligase
   Arad_2991 (ddlB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 GARS_A ATP-grasp_3 CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID: ACM27043
UniProt: B9JH46
LinkDB All DBs
Position
1:complement(2371932..2372858)
Genome map
AA seq 308 aa AA seqDB search
MGGKHVAVLLGGFSSERPVSLSSGKACADALEAEGYRVTRVDVERDVSARLADLKPDVVF
NALHGPFGEDGTIQGVLEYLQIPYTHSGVMASALAMDKARAKTVAASAGIPVAASLVLNR
FDIAGEHPMPAPYVVKPVREGSSFGVVIVKEEQAHPPQIIASSEWRYGDEVMVERYIHGR
ELTCGVMGDTALGVTEIVPQGHSFYDYDSKYAAGGSKHVIPAEISPNLYQKIQLLALRAH
QAIGCRGVSRSDFRFDDRFSEEGELIWLEINTQPGMTPTSLLPEMAAHAGYSFGEFLRWM
VEDSSCSR
NT seq 927 nt NT seq  +upstreamnt  +downstreamnt
atgggtggcaagcatgtggctgtccttttgggcggattttcctcggagaggcctgtcagc
ctgtcctcgggaaaggcatgcgctgatgccctggaggccgaaggctatcgcgttacgcgc
gtcgacgtcgagcgcgacgtgtccgcgcgtcttgccgacctgaagccggatgtcgttttc
aatgctctgcacggtcctttcggtgaggatggcacgatccagggtgtcctcgaatatctg
cagattccctatacgcattccggcgtgatggcttcggcgctggcgatggacaaggcccgc
gccaagacggttgcggcttcggccggcattcctgtcgctgcttcgcttgtcctgaaccgc
ttcgatattgccggcgagcatccgatgccggcgccgtacgtcgtcaagccggtgcgggaa
gggtccagcttcggtgttgtgatcgtcaaggaagagcaggcgcatccgccgcagatcatc
gcctcgtcggaatggcgatatggtgatgaggtcatggtcgagcgttatatccatggtcgt
gaactgacctgcggcgtcatgggcgatacggcactcggcgtcaccgagatcgtacctcag
ggccatagtttctacgactacgattccaaatatgcggcgggtggatcaaaacacgtcatc
ccggcggaaatttcaccgaatctttaccaaaagatacaattattggcgttaagggcgcat
caagctatcggctgccgtggcgtcagccggtctgacttccgttttgacgatcgcttctcc
gaggagggtgagcttatctggttggagatcaacacccagccaggcatgacgcctacctcg
ctgttgcccgaaatggcggctcacgccggctattcttttggtgaatttctccggtggatg
gtggaggactcgtcttgttcgcgctga

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