Arachidicoccus sp. BS20: A9P82_10180
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Entry
A9P82_10180 CDS
T04406
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
arb
Arachidicoccus sp. BS20
Brite
KEGG Orthology (KO) [BR:
arb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
arb03016
]
A9P82_10180
Enzymes [BR:
arb01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
A9P82_10180
Transfer RNA biogenesis [BR:
arb03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
A9P82_10180
Prokaryotic type
tRNA splicing ligases
A9P82_10180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
ANI89622
UniProt:
A0A191TLP4
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All DBs
Position
complement(2266969..2268414)
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AA seq
481 aa
AA seq
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MKLKITGKELRAIGYPENPVISIAMNVMQKHYKFIDKGDAMVLLKNILATPNEYKDDKIL
GIIAEQLIPKEKAEGEEISLNQYGIQFSVFGQEHIDEKAMHQMYQAAKLPVSVAGALMPD
AHSGYGLPIGGVLATDNAVIPYGVGVDIGCRMCLSIFDIHPQELKSKEAFFVRELGAATL
FGSSAQFRQAEDHAIMDNELFYQLPLLKTLHGRAWKQLGSSGSGNHFAEFGIIEIVEKDE
TLNVETGLYVGFLTHSGSRALGANIANYYTKLAISKRRLPQEAKNLAWLSLDEEAGMEYW
LSMNLAGDYASACHHVIHDKIAKQLGRKPVKMVENHHNFAWKEMLDGKEMVVHRKGATPA
GKNVLGIIPGSMTADGFIVKGRGETASINSASHGAGRKMSRSRAIESVTDKQFKDELQKF
GVKLLGGGLDESPFAYKDIHTVMQSQKALVDVVGKFTPKIVKMDGAKHKIWKKKNDEIPG
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaaaataacaggaaaagaattgcgggcaatcggttatcccgaaaatcccgtc
atcagtattgccatgaatgtgatgcaaaagcattacaagtttatagataaaggagatgca
atggtattgctgaaaaatattttagcaacgccgaatgaatacaaagacgataaaatatta
ggcatcatcgcggaacaattaatcccgaaagaaaaagcggaaggcgaagaaatatcattg
aatcaatacggtattcagttctccgtattcggacaggagcatatcgatgaaaaagccatg
caccaaatgtaccaggcggcaaaacttcccgtaagtgttgcaggagctttgatgcccgat
gcacacagcggttacggcttgccaatcggcggcgtgctggcaacagacaatgcggtaatt
ccttatggcgttggtgtggacattggctgcaggatgtgtttaagcatctttgatattcat
ccgcaggaattgaaaagtaaagaagcattttttgtacgtgaattgggtgcggcaacttta
tttggcagcagcgctcagtttaggcaggcagaagatcatgcaataatggacaatgaattg
ttttatcaattgccattgttgaaaaccttacacggcagggcgtggaagcaattaggctct
tcaggttcagggaatcattttgcggagttcggcattattgaaattgtagaaaaggatgaa
acgttgaatgtggaaacgggattgtatgtaggttttcttacacattccggaagccgtgca
ctgggtgctaatattgccaattattatacaaaactcgctatcagtaaaaggcggttaccg
caggaagccaagaatcttgcgtggctttcgctggacgaagaagcgggcatggaatattgg
ctgtcaatgaaccttgcaggcgattatgcttccgcttgtcatcatgtgattcatgataaa
attgcaaagcaactaggacgcaagcccgtcaaaatggtggaaaaccatcacaactttgca
tggaaagaaatgctcgacgggaaagaaatggttgtgcacagaaaaggcgctacgccggcg
ggcaaaaatgttttgggcattattcccggctctatgacagccgacggatttatcgtgaaa
ggcagaggagaaacagcttccattaattccgcttcgcatggtgcaggcagaaagatgagc
cgttcacgtgccattgaatctgttacggacaaacagttcaaagacgaactacaaaaattt
ggcgtaaaacttttgggcggcggcttggacgaatctcctttcgcttacaaagacattcat
accgtaatgcaatcacagaaggcgttagtcgatgttgtgggaaaattcacaccgaagatt
gtgaaaatggacggtgcgaagcataaaatatggaaaaagaaaaatgatgaaataccgggg
gaataa
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