Rhizobium rhizogenes K599: B0909_02190
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Entry
B0909_02190 CDS
T04767
Name
(GenBank) DUF4130 domain-containing protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
aro
Rhizobium rhizogenes K599
Pathway
aro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B0909_02190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aro03400
]
B0909_02190
Enzymes [BR:
aro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
B0909_02190
DNA repair and recombination proteins [BR:
aro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B0909_02190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
AQS61205
UniProt:
A0AA86LHJ3
LinkDB
All DBs
Position
1:complement(1883621..1885075)
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AA seq
484 aa
AA seq
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MTYGPVLEGRGDFGEWRDAARAALAASIPPEAIDWRLRDDGAGLLDCTGEPLPVASADAA
RVSVPASFVALAQAVICHGDRGRFALLYRLLWRLGQDRALLQFKSDADVSQARLLEKSVR
RDCHKMTAFVRFKELPLPQGQGGRRRFVAWFEPDHFIVERAAPFFQRRFTDMDWLIATPK
GSARWDGSVLQTSREAAVKPDLTDETDDLWRTYYANIFNPARLKIKAMTAEMPKKYWKNL
PEAELIPSLVLGAEARVLDMAARQASQPQPFHHRLQAVAAAAREVSPPAPADGLSSLKRQ
ADQCTRCPLHCRATQTVFGEGPENADVMIVGEQPGDHEDLAGQPLVGPAGRLFDRTLGEI
GVERRQLYVTNAVKHFKYETRGKRRIHQRPDAGEVQQCRWWLNQEIALVQPKLIVAMGAT
ALYALTGGKEKLTELRGRPLPMQEGRTLFVTVHPSYLLRLPDALAKEREILRFKKDMEFI
RLFE
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
gtgacatatggcccggttctcgaagggcggggtgatttcggcgagtggcgcgatgccgcg
cgcgcggcgcttgccgccagcataccgcccgaggcaattgactggcggttgcgcgatgac
ggggccggacttctggattgtaccggcgagcccttgccggtggcgtcggcggatgctgcc
cgggtttctgttcccgcctctttcgtggcactggcgcaggctgtgatctgccacggtgat
cggggtcgtttcgcgctgctttaccggctgttgtggcggctgggacaggatcgcgccctg
ctgcagttcaagtccgatgcggatgtttcgcaggcgcgactgctcgaaaaatccgttcgc
cgcgattgtcacaagatgacggccttcgttcgtttcaaggaattgccgttgccgcaggga
cagggcgggcgacggcgctttgtcgcctggttcgagccggatcatttcatcgtcgagcgt
gcggcgccgtttttccagcggcgcttcaccgacatggactggttgatcgcgacgccgaaa
gggtcggcgcgatgggacggaagcgtgctgcagacgtcgcgggaggcggcagtcaaaccc
gatttgacggatgaaacggatgacctctggcggacctattatgccaatattttcaatccg
gctcgcctgaaaatcaaggcgatgacggcggagatgccgaagaaatactggaagaacctg
cctgaagcggaactcattcccagccttgttctcggtgcggaagcacgggtgctcgacatg
gcggccaggcaggcaagccagccgcagccgtttcaccatcgtttgcaggccgtggcggcc
gcggcgcgggaagtgtccccaccggccccagccgacgggctttcctcattgaagcggcag
gctgaccaatgtacgcgatgccccctgcattgcagggcgacgcagacggttttcggcgag
gggccggaaaatgcggatgtcatgatcgtcggcgaacagcccggtgaccacgaggatctt
gccgggcaacctctcgtcggccccgcaggccggctgtttgaccggacgcttggtgagatc
ggggtggaacgcagacagctttacgtcaccaatgctgtcaagcatttcaaatatgagaca
cgcggcaagcggcgcatccaccagcggccggatgcgggcgaagtgcagcaatgccgctgg
tggctcaatcaggaaatcgcgctggttcaaccgaagctcatcgtcgccatgggtgcgacc
gcgctctatgcgttgaccggcggcaaggagaagctcaccgagcttcgtggccgtcctctt
cccatgcaggaggggcggacgctttttgtcacggtgcatccatcctatctgctgcgcctg
ccggatgcgctggcgaaggagcgggaaattctccgattcaaaaaagatatggagtttata
agattattcgaataa
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