KEGG   Arthrobacter sp. U41: ASPU41_07235Help
Entry
ASPU41_07235      CDS       T05053                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
aru  Arthrobacter sp. U41
Pathway
aru03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:aru00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    ASPU41_07235
Enzymes [BR:aru01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     ASPU41_07235
DNA repair and recombination proteins [BR:aru03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     ASPU41_07235
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_OB_2
Motif
Other DBs
NCBI-ProteinID: AOT05411
UniProt: A0A1C9WVY0
LinkDB All DBs
Position
complement(1551450..1553942)
Genome map
AA seq 830 aa AA seqDB search
MVVTNLDKVMYPETGTTKADVLAYYAAVAPVLIAAAANRPATRKRWVHGVGTADAPGEMF
FQKNLDHSTPGWVPRASIMHKERTIQYPLVNDPATLAWLAQIAALEIHVPQWRVDSHGNA
LPPDRLVLDLDPGEGAGLAECAEVARLARTILQDVGLDPVPVTSGSKGIHLYAALDGTQS
SEQISDFAHELARSLEADHPELAVSDMKKTLRTGKVLVDWSQNSAAKTTIVPYSLRGRLR
PTVAAPRYWRELSSPSLHQLDYQEVLQRVKSGKDPFAVISGRGRPGARHNGHPGDAPGEA
PGDGGDTDPRLERYRTKRDSASTPEPFSAERYRAEAAEGTVREKFVIQEHHASRLHYDFR
LERDGVLVSWALPKGVPTSKTKNHLAVQTEDHPMDYADFEGTIPKGQYGAGTVSIWDRGY
YECEKWIAGKEVIVTLTGQDEGGLGGTRRFALIHTGRADDQWLIHLMDPPGSKKGHAQAE
ASASDASAGAPDDDAQHDAPGLSGAAARESAAPGTSDFTPMLASAGTPADLSGKEWQFEL
KWDGVRALIVGDTKKIRLISRNGNDMSAVYPELTDRSCWPERDFVADGEIIAVGGSGRPD
FGLLQGRMKLTKASDIAKAQASTPVRLMLFDLLSENGRDLRRLPLSKRRAGLEAFFTPSG
CPVELSPLIDGDVRHILESAEELGLEGVMAKRTGGRYVGQRSRSWLKLKFERTQEVVVGG
WRPGKGGRGQSVGSLLLGIPDGSKLRYVGRVGSGFSDRELKELRQQLDALPRKTSPFLEV
PAADASDAHWVSARLVGEVTYGEWTGTGKLRHPVWRGWRLDKKPEDVVFE
NT seq 2493 nt NT seq  +upstreamnt  +downstreamnt
ctggtggtcaccaatctggacaaggtgatgtatccggagaccggcaccaccaaggccgac
gttctggcctactacgccgcggtggcgcccgtgctgatcgcggccgccgcgaaccggccg
gccacccggaagcgctgggtgcacggcgtcgggacggccgatgcccccggcgagatgttc
ttccagaaaaaccttgaccattcgaccccggggtgggtgccccgggcctccatcatgcac
aaggagaggaccatccagtacccgctggtcaatgatccggccacgctcgcctggctcgcg
cagatcgcggccctcgagatccatgtgccgcagtggcgcgtcgactcgcatggaaatgcc
ctgcccccggaccggctggtgctggacctggatcccggcgagggggccgggctggccgaa
tgtgccgaggtggcgaggctcgcccgcaccatcctgcaggacgtgggcctggatcctgtg
ccggtaaccagcggcagcaagggcatccacctgtacgccgccctcgacggcacgcagagc
tccgagcagatctcggattttgcccatgaactggcacgctcgctggaagccgaccacccg
gaactggccgtgagcgacatgaagaagaccctgcgcaccggcaaggtcctggtggactgg
agccagaacagcgccgcgaagacaaccatcgtcccgtattccctgcgcgggaggctccgg
cctaccgtggcggcgccccggtactggcgcgaactcagctcgccgtcgctgcaccagctc
gattaccaggaggtcctgcagcgggtgaagtccggcaaggatccgttcgctgttatttcc
ggccgggggcggccgggggcccggcataacggccatccgggcgacgctcccggggaagca
cccggtgacggcggcgacaccgatccgcggctggaaaggtaccggaccaagcgggactcg
gcctcgaccccggagccgttcagcgcggagcggtaccgcgccgaggccgcagagggcact
gtccgggagaagttcgtcatccaggaacaccacgccagccggctgcactatgacttcagg
ctggagcgcgacggcgtgctggtgtcctgggcgctgcccaagggtgtccccacgagcaaa
acgaagaaccacctggcggtccagaccgaggaccacccgatggactacgcggacttcgag
ggcaccattccgaagggccagtacggcgccggaaccgtcagcatctgggaccgcggctac
tacgagtgcgagaagtggatcgccggaaaagaggtcatcgttaccctcaccgggcaggac
gagggcggcctgggcgggacccgcaggttcgcgctgatccacaccggccgggccgacgac
caatggctcatccacctgatggacccgcccggctctaagaaggggcacgctcaagcggag
gcgtcggcgtcggacgcctccgccggggcgccggacgacgacgcacagcacgacgctccg
ggcctctccggcgcggcagcgcgggagagtgccgcccccggcacgtcggacttcactccg
atgctggccagtgccggaacccccgccgacctgtccggcaaggaatggcagttcgagctc
aagtgggacggggtacgtgccctgatcgtcggtgacacgaaaaaaatccgcctgatcagc
cgcaacggcaacgatatgtccgcggtgtatccggaactgacggaccgttcctgctggccg
gaacgggatttcgtcgccgacggggagatcatcgccgtcggcggttcggggcgccccgac
ttcgggctgctgcaggggcggatgaagctcaccaaagcctccgacattgcgaaggctcag
gcgtcgacgccggtgcggctgatgctgttcgacctgctgtccgagaatggcagggacctg
cgccgcctcccgttgagcaaacggcgggccgggctggaagcgttcttcaccccttccggc
tgcccggtggaactctccccgctgatcgacggcgatgtccggcacatcctggaaagcgcc
gaggagctggggctggagggcgtgatggccaagcgcaccggcggccggtacgtggggcag
cgcagcaggtcctggctcaaactcaagttcgaacgcacccaggaggtggtggttggcggc
tggcggccgggaaagggcggacgcgggcagtccgtgggttcactcctgctggggatcccg
gacggttccaagctgcgctacgtcgggcgggttggcagcggattcagcgaccgggagctc
aaggagcttcgccagcagcttgatgcgctcccgcggaagacctcgccgttcctggaggtt
ccggcggccgatgcctcggacgcccactgggtgagcgcccggcttgttggagaggtcacc
tatggggaatggacgggtaccggcaagctccggcacccggtgtggcgcggctggcggctg
gacaagaagcctgaggacgtggtcttcgaatag

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