Aeromonas rivipollensis: C7N77_20500
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Entry
C7N77_20500 CDS
T05453
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
arv
Aeromonas rivipollensis
Brite
KEGG Orthology (KO) [BR:
arv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arv03019
]
C7N77_20500
03009 Ribosome biogenesis [BR:
arv03009
]
C7N77_20500
Messenger RNA biogenesis [BR:
arv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C7N77_20500
Ribosome biogenesis [BR:
arv03009
]
Eukaryotic type
Pre-60S particles
RNases
C7N77_20500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AVP95309
LinkDB
All DBs
Position
complement(4429569..4430114)
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AA seq
181 aa
AA seq
DB search
MTVSAQNLVWIDMEMTGLDPEENVVLEIATIVTDKDLNVLAQGPVIAIHQSDEELAKMDD
WNVNTHTKSGLVARVKASEHDEARAVAETLDFIRQWVPERTSPLCGNSIGQDRRFMVKHM
GELEAFFHYRNVDVSTIKELVRRWQPELLEKFTKSGSHQALDDIRESIAELQFYRSHVFK
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcagcgcgcagaacctggtatggatcgacatggagatgacggggctggacccc
gaagagaacgtggttctggagattgccaccatcgtcaccgacaaggatctgaacgtgctg
gcacaggggcccgtcatcgccattcaccagagcgatgaagagctggccaagatggacgac
tggaacgtcaacacccacaccaagagcgggctggtggcccgggtcaaggcgagcgagcac
gacgaagcccgcgccgtggccgagaccctcgacttcatccgccaatgggtgccggagcgc
accagccccctgtgcggcaacagcataggccaggatcgccgcttcatggtcaagcacatg
ggcgagctggaagccttcttccactaccgtaacgtcgacgtcagcaccatcaaggagctg
gtgcgccgctggcagccggagctgctggaaaagttcaccaagagcggttcccatcaggcg
ctggacgacatccgcgagtccatcgccgaactgcagttctaccgcagccacgtcttcaaa
atctga
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