KEGG   Arthrobacter sp. YC-RL1: ATC04_16440
Entry
ATC04_16440       CDS       T04187                                 
Name
(GenBank) hypothetical protein
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
ary  Arthrobacter sp. YC-RL1
Pathway
ary03030  DNA replication
ary03430  Mismatch repair
ary03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ary00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ATC04_16440
   03430 Mismatch repair
    ATC04_16440
   03440 Homologous recombination
    ATC04_16440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ary03032]
    ATC04_16440
   03400 DNA repair and recombination proteins [BR:ary03400]
    ATC04_16440
Enzymes [BR:ary01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ATC04_16440
DNA replication proteins [BR:ary03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ATC04_16440
DNA repair and recombination proteins [BR:ary03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ATC04_16440
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNA_pol3_gamma3 AAA_22 AAA_14 AAA_19 Rad17 nSTAND3 RuvB_N AAA_28
Other DBs
NCBI-ProteinID: ALQ31972
LinkDB
Position
3578337..3582047
AA seq 1236 aa
MTALEKNRVNHAYLFSGPRGCGKTTSARILARCLNCEQGPTPIPCGTCPSCVELANGGPG
SLDVIEIDAASHGGVEDARDLRERATFAPARDRYKIFIIDEAHMVTSAGFNALLKIVEEP
PAHIKFIFATTEPDKVIGTIRSRTHHYPFRLVPPEALLEYLKVLCDRENVAVAEGVLPLV
IRAGAGSVRDTLSVLDQLMAGAREGILDYETAIALLGYTHSTLLDEVVLSLHESDGAGLF
SAIDRIIQTGLDPRRFVEDLLERFRDLVIAKAMPEGLEKILRGVPADQLEALHLQAGLAG
AGELSRWADVTNQALTDMTGATSPRLHLELLAARLLLPGSQSSDSSFAARLDRLERHAMT
GGALPALDGEGSEDVAVSMGSAPNPGAARQGAAAVRQALAAAKARRDGEPIPEALAEAPA
ETQPAPVQQAPVQQAPAQPASAPQDQHTQPAQRHQESQVPHASQAPAQPQPDAQQQTAAQ
AQAADDLNAPLDPGAAASLNTGADADWGATWGPKEDRNPVTTEIQPGPSVPAERPDGVAP
FSLVPDPASGEDLSFGTGVSIDDVKQNPAMAEFARRAAETRAQQQSQQQAQAAARQNQAP
QQQQAAPVPPIQPDSEAQQRAAYEQAQHLQNPAQQSQAPQQHQQQHVAQVPPIQPDSEAQ
QRAAYEQAQREQAQREAAQRQQAEHEAAQRAAQEQAAREQAQREAAQRQQAEYEAAQRAA
QEQAAREQAQREQAQREAAQRQQAQSAQQQNQYQQQHPQQGNQPTAAPAGASPVAKFQQA
WPQILEQLQSNSRVLHSMVSNYGSVAGFDGRTLTLAFSNSGPIVNLRNRPDMMQTLTGVL
SQVAGGPIEVVITEGGSNPAGGGSPKGERRPIPAPTPAPTKFIKADSAGVASRPSKPASA
RTAAAPATRKSPAPAAPAAAAPARDNGYVSSYDDVPPPYDEPYMDEPPFPDDGAFGDPYA
ATKPQAPSPAPAQPAAPAAPPVQQVQPIQPEAPAFQAPVAPAPQRSSAPRSFDGPPVAPR
PRMTAGMNARQAERPGFSIDRPVSSTPLRPGSTTGSFEPAASAREPEPQAPEPIQTQSQA
PAQQAPSQQAASAPVAPAPHGAPQQFRPAQPPQAPARETAPSWGAPDPAAQPASTPSDPR
PSAGSGRMSRYQQLMNQAKDAAPAAAPVQSASGWGGAPLPPEPAMEDPYEFVPSDDDIEV
EDSALIGVPAVERLLGGMVIEQRDVNGNIVEIKRSL
NT seq 3711 nt   +upstreamnt  +downstreamnt
atgaccgctctggagaagaaccgggtcaatcacgcatacctgttctccggaccgcgcggt
tgcggcaagaccacttcggcccgcatcctcgcgcgctgcctgaactgcgagcagggtccc
actccgatcccgtgcggcacctgcccgagctgcgtcgagctggccaacggcggccccggt
tccctggacgtcatcgaaatcgacgccgccagccacggtggcgtggaagatgcccgcgac
ttgcgcgagcgtgcgacgttcgcccctgcccgcgaccgctacaagatcttcatcatcgat
gaggcccatatggtcacctcggcaggcttcaacgcgctgctgaagatcgtcgaagagccg
ccggcgcacatcaagttcatcttcgcgacgaccgagccggacaaggtcatcggcaccatc
cgttcgcgcacccaccactacccgttccgcttggtgccgcccgaggcgctgctggaatac
ctcaaggtcctctgcgaccgcgaaaacgtcgcggtggccgagggcgtgctgccgctggtc
attcgcgccggagcaggctcggtccgcgataccctgtcggtgcttgaccagctcatggcc
ggcgcccgcgaagggatcctggactacgaaaccgccatcgcgctgctgggctacacccac
tccacgctgctggacgaggtcgtcctctccctgcacgaatcagacggggccggattgttc
agcgcgatcgaccgcatcatccagaccggacttgatccgcgtcgcttcgtcgaggacctg
ctggagcgcttccgcgacctggtgatcgccaaggcgatgccggagggcctggagaagatc
ctgcgcggagttcccgccgaccagctcgaagccctgcacctgcaggccgggctggccgga
gccggcgagctgtcccgctgggccgatgtcaccaatcaggcgctgaccgacatgaccggc
gcaacctccccgcgcctgcaccttgagctgctggccgcgcgcctgctgcttcccggttcg
cagagctcggacagttccttcgccgcccggctggaccgcttggagcgccatgccatgacc
ggcggggcgctgcccgcgctggatggcgagggatccgaggacgttgccgtctccatgggc
tcggcgccgaatcctggcgcagcgcgccagggcgccgccgccgtacgccaggctctggcc
gcggccaaggcccgccgcgacggagagccgattcccgaagcgcttgcagaagctccggcc
gaaacccagcctgcaccggttcagcaggctcccgtgcagcaggctccggcgcagcccgca
tcggccccgcaggatcagcacacccagccagcccagcggcaccaggaatcccaggttccg
cacgcttcccaggcgcctgcccagccgcagccagacgcacagcagcagaccgccgcccag
gctcaggccgcggacgatctcaacgctccgctggatccgggagcggcagcctcgctgaac
accggcgcggacgccgattggggcgccacttggggaccgaaggaagaccggaacccggtc
accaccgagatccagcccggcccgagcgttccggccgagcgccccgacggcgtcgcgccg
ttcagcctggtgccggatccagccagcggcgaagacctgtccttcgggaccggtgtctcc
atcgacgacgtcaagcagaaccctgccatggctgaattcgcccgccgcgcggcagaaacc
cgcgcccagcagcagtcgcagcagcaagcccaggccgctgcccggcaaaaccaggccccg
caacagcagcaggcagccccggtcccgccgatccagccggactccgaagcacagcagcgc
gccgcctacgaacaggcacagcacttgcagaacccggctcagcagagccaggcaccgcag
caacaccagcagcagcatgtcgcccaggtcccgccaatccagccggactccgaagcacag
cagcgcgccgcctatgaacaagctcagcgtgagcaggcccaacgtgaagccgcccaacgc
cagcaggccgaacatgaagcagcccagcgtgcagcccaggaacaggccgcccgtgaacag
gcgcagcgtgaagccgcccagcgccagcaggccgagtacgaagcagcccaacgcgcagcc
caggaacaggccgcccgagagcaggcacagcgcgaacaagcccaacgcgaagcggcgcag
cgccagcaggcgcagtccgcccagcagcagaaccagtaccagcagcagcaccctcagcag
ggaaaccagccaacggctgctccagccggagcttctccggtcgccaagttccagcaggcc
tggccgcagattctggaacagctgcagtccaactcgcgcgtgctgcactccatggtgtcg
aactacggatcggtcgccggattcgacggccgcacgctgacgcttgccttcagcaattcc
ggtccgatcgtcaatctgagaaaccgaccggacatgatgcagacgctcaccggagtgctt
tcgcaggtggctggcgggccgatcgaggttgtcatcaccgaaggcggctcgaaccctgca
ggcggtggttccccaaaaggtgagcgccggccgatcccggcgccaaccccagcaccaacc
aagttcatcaaggctgattccgctggggtagcttcgcgcccctcgaagcctgcatcggcc
cggaccgcggccgctccggcgacacgcaagtccccggcacccgctgcgccggctgccgcc
gcgcccgcgcgagacaacggctacgtatccagctacgacgacgtgcctccgccgtacgac
gagccgtacatggacgagccgccgttccctgacgacggcgccttcggcgacccctacgca
gcgacgaaaccccaggctccgtcgcctgctccggctcagccagcggctcccgccgcgcca
ccggtccagcaggtccagccgatccagcctgaagcacctgctttccaggctccggtggct
ccggccccgcagcgcagcagcgccccgcgttccttcgacggcccgccggtggctccgcgc
ccgcgcatgaccgccgggatgaacgcccgccaggccgaacgtcccggcttctcgatcgac
cgcccggtgtcctcgacgccgctgcgcccgggcagcaccaccggctccttcgagccggcg
gccagcgcccgcgagcccgagccgcaggcccctgaaccgatccagacgcagtcccaggcc
cccgcgcagcaagctccgtcccagcaggcagcttcggcacccgttgccccggcgccgcac
ggcgctccgcagcagttccggcccgcgcagccgccgcaggcccctgcccgggaaaccgct
ccgtcttggggcgccccggatccggccgcgcagcccgcgagcaccccgtcggacccgcgt
ccgagcgcaggctccgggcgcatgagccgctaccagcagctgatgaaccaggcaaaggac
gctgctccggccgccgcgccggtgcagtccgccagcggctggggtggcgcgccgctgccg
cccgaacctgcgatggaggatccctacgagttcgtcccgagcgacgacgacatcgaggtg
gaggactccgccctgatcggcgttcctgcggtcgagcggctgctcggcggtatggtcatc
gagcagcgcgacgtgaacggcaacatcgtggaaatcaagcgcagcctgtga

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