Arthrobacter sp. YC-RL1: ATC04_16440
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Entry
ATC04_16440 CDS
T04187
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ary
Arthrobacter sp. YC-RL1
Pathway
ary03030
DNA replication
ary03430
Mismatch repair
ary03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ary00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ATC04_16440
03430 Mismatch repair
ATC04_16440
03440 Homologous recombination
ATC04_16440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ary03032
]
ATC04_16440
03400 DNA repair and recombination proteins [BR:
ary03400
]
ATC04_16440
Enzymes [BR:
ary01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ATC04_16440
DNA replication proteins [BR:
ary03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ATC04_16440
DNA repair and recombination proteins [BR:
ary03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ATC04_16440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
AAA_22
AAA_14
AAA_19
Rad17
nSTAND3
RuvB_N
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ALQ31972
LinkDB
All DBs
Position
3578337..3582047
Genome browser
AA seq
1236 aa
AA seq
DB search
MTALEKNRVNHAYLFSGPRGCGKTTSARILARCLNCEQGPTPIPCGTCPSCVELANGGPG
SLDVIEIDAASHGGVEDARDLRERATFAPARDRYKIFIIDEAHMVTSAGFNALLKIVEEP
PAHIKFIFATTEPDKVIGTIRSRTHHYPFRLVPPEALLEYLKVLCDRENVAVAEGVLPLV
IRAGAGSVRDTLSVLDQLMAGAREGILDYETAIALLGYTHSTLLDEVVLSLHESDGAGLF
SAIDRIIQTGLDPRRFVEDLLERFRDLVIAKAMPEGLEKILRGVPADQLEALHLQAGLAG
AGELSRWADVTNQALTDMTGATSPRLHLELLAARLLLPGSQSSDSSFAARLDRLERHAMT
GGALPALDGEGSEDVAVSMGSAPNPGAARQGAAAVRQALAAAKARRDGEPIPEALAEAPA
ETQPAPVQQAPVQQAPAQPASAPQDQHTQPAQRHQESQVPHASQAPAQPQPDAQQQTAAQ
AQAADDLNAPLDPGAAASLNTGADADWGATWGPKEDRNPVTTEIQPGPSVPAERPDGVAP
FSLVPDPASGEDLSFGTGVSIDDVKQNPAMAEFARRAAETRAQQQSQQQAQAAARQNQAP
QQQQAAPVPPIQPDSEAQQRAAYEQAQHLQNPAQQSQAPQQHQQQHVAQVPPIQPDSEAQ
QRAAYEQAQREQAQREAAQRQQAEHEAAQRAAQEQAAREQAQREAAQRQQAEYEAAQRAA
QEQAAREQAQREQAQREAAQRQQAQSAQQQNQYQQQHPQQGNQPTAAPAGASPVAKFQQA
WPQILEQLQSNSRVLHSMVSNYGSVAGFDGRTLTLAFSNSGPIVNLRNRPDMMQTLTGVL
SQVAGGPIEVVITEGGSNPAGGGSPKGERRPIPAPTPAPTKFIKADSAGVASRPSKPASA
RTAAAPATRKSPAPAAPAAAAPARDNGYVSSYDDVPPPYDEPYMDEPPFPDDGAFGDPYA
ATKPQAPSPAPAQPAAPAAPPVQQVQPIQPEAPAFQAPVAPAPQRSSAPRSFDGPPVAPR
PRMTAGMNARQAERPGFSIDRPVSSTPLRPGSTTGSFEPAASAREPEPQAPEPIQTQSQA
PAQQAPSQQAASAPVAPAPHGAPQQFRPAQPPQAPARETAPSWGAPDPAAQPASTPSDPR
PSAGSGRMSRYQQLMNQAKDAAPAAAPVQSASGWGGAPLPPEPAMEDPYEFVPSDDDIEV
EDSALIGVPAVERLLGGMVIEQRDVNGNIVEIKRSL
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctctggagaagaaccgggtcaatcacgcatacctgttctccggaccgcgcggt
tgcggcaagaccacttcggcccgcatcctcgcgcgctgcctgaactgcgagcagggtccc
actccgatcccgtgcggcacctgcccgagctgcgtcgagctggccaacggcggccccggt
tccctggacgtcatcgaaatcgacgccgccagccacggtggcgtggaagatgcccgcgac
ttgcgcgagcgtgcgacgttcgcccctgcccgcgaccgctacaagatcttcatcatcgat
gaggcccatatggtcacctcggcaggcttcaacgcgctgctgaagatcgtcgaagagccg
ccggcgcacatcaagttcatcttcgcgacgaccgagccggacaaggtcatcggcaccatc
cgttcgcgcacccaccactacccgttccgcttggtgccgcccgaggcgctgctggaatac
ctcaaggtcctctgcgaccgcgaaaacgtcgcggtggccgagggcgtgctgccgctggtc
attcgcgccggagcaggctcggtccgcgataccctgtcggtgcttgaccagctcatggcc
ggcgcccgcgaagggatcctggactacgaaaccgccatcgcgctgctgggctacacccac
tccacgctgctggacgaggtcgtcctctccctgcacgaatcagacggggccggattgttc
agcgcgatcgaccgcatcatccagaccggacttgatccgcgtcgcttcgtcgaggacctg
ctggagcgcttccgcgacctggtgatcgccaaggcgatgccggagggcctggagaagatc
ctgcgcggagttcccgccgaccagctcgaagccctgcacctgcaggccgggctggccgga
gccggcgagctgtcccgctgggccgatgtcaccaatcaggcgctgaccgacatgaccggc
gcaacctccccgcgcctgcaccttgagctgctggccgcgcgcctgctgcttcccggttcg
cagagctcggacagttccttcgccgcccggctggaccgcttggagcgccatgccatgacc
ggcggggcgctgcccgcgctggatggcgagggatccgaggacgttgccgtctccatgggc
tcggcgccgaatcctggcgcagcgcgccagggcgccgccgccgtacgccaggctctggcc
gcggccaaggcccgccgcgacggagagccgattcccgaagcgcttgcagaagctccggcc
gaaacccagcctgcaccggttcagcaggctcccgtgcagcaggctccggcgcagcccgca
tcggccccgcaggatcagcacacccagccagcccagcggcaccaggaatcccaggttccg
cacgcttcccaggcgcctgcccagccgcagccagacgcacagcagcagaccgccgcccag
gctcaggccgcggacgatctcaacgctccgctggatccgggagcggcagcctcgctgaac
accggcgcggacgccgattggggcgccacttggggaccgaaggaagaccggaacccggtc
accaccgagatccagcccggcccgagcgttccggccgagcgccccgacggcgtcgcgccg
ttcagcctggtgccggatccagccagcggcgaagacctgtccttcgggaccggtgtctcc
atcgacgacgtcaagcagaaccctgccatggctgaattcgcccgccgcgcggcagaaacc
cgcgcccagcagcagtcgcagcagcaagcccaggccgctgcccggcaaaaccaggccccg
caacagcagcaggcagccccggtcccgccgatccagccggactccgaagcacagcagcgc
gccgcctacgaacaggcacagcacttgcagaacccggctcagcagagccaggcaccgcag
caacaccagcagcagcatgtcgcccaggtcccgccaatccagccggactccgaagcacag
cagcgcgccgcctatgaacaagctcagcgtgagcaggcccaacgtgaagccgcccaacgc
cagcaggccgaacatgaagcagcccagcgtgcagcccaggaacaggccgcccgtgaacag
gcgcagcgtgaagccgcccagcgccagcaggccgagtacgaagcagcccaacgcgcagcc
caggaacaggccgcccgagagcaggcacagcgcgaacaagcccaacgcgaagcggcgcag
cgccagcaggcgcagtccgcccagcagcagaaccagtaccagcagcagcaccctcagcag
ggaaaccagccaacggctgctccagccggagcttctccggtcgccaagttccagcaggcc
tggccgcagattctggaacagctgcagtccaactcgcgcgtgctgcactccatggtgtcg
aactacggatcggtcgccggattcgacggccgcacgctgacgcttgccttcagcaattcc
ggtccgatcgtcaatctgagaaaccgaccggacatgatgcagacgctcaccggagtgctt
tcgcaggtggctggcgggccgatcgaggttgtcatcaccgaaggcggctcgaaccctgca
ggcggtggttccccaaaaggtgagcgccggccgatcccggcgccaaccccagcaccaacc
aagttcatcaaggctgattccgctggggtagcttcgcgcccctcgaagcctgcatcggcc
cggaccgcggccgctccggcgacacgcaagtccccggcacccgctgcgccggctgccgcc
gcgcccgcgcgagacaacggctacgtatccagctacgacgacgtgcctccgccgtacgac
gagccgtacatggacgagccgccgttccctgacgacggcgccttcggcgacccctacgca
gcgacgaaaccccaggctccgtcgcctgctccggctcagccagcggctcccgccgcgcca
ccggtccagcaggtccagccgatccagcctgaagcacctgctttccaggctccggtggct
ccggccccgcagcgcagcagcgccccgcgttccttcgacggcccgccggtggctccgcgc
ccgcgcatgaccgccgggatgaacgcccgccaggccgaacgtcccggcttctcgatcgac
cgcccggtgtcctcgacgccgctgcgcccgggcagcaccaccggctccttcgagccggcg
gccagcgcccgcgagcccgagccgcaggcccctgaaccgatccagacgcagtcccaggcc
cccgcgcagcaagctccgtcccagcaggcagcttcggcacccgttgccccggcgccgcac
ggcgctccgcagcagttccggcccgcgcagccgccgcaggcccctgcccgggaaaccgct
ccgtcttggggcgccccggatccggccgcgcagcccgcgagcaccccgtcggacccgcgt
ccgagcgcaggctccgggcgcatgagccgctaccagcagctgatgaaccaggcaaaggac
gctgctccggccgccgcgccggtgcagtccgccagcggctggggtggcgcgccgctgccg
cccgaacctgcgatggaggatccctacgagttcgtcccgagcgacgacgacatcgaggtg
gaggactccgccctgatcggcgttcctgcggtcgagcggctgctcggcggtatggtcatc
gagcagcgcgacgtgaacggcaacatcgtggaaatcaagcgcagcctgtga
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