Aeromonas salmonicida subsp. salmonicida A449: ASA_3067
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Entry
ASA_3067 CDS
T00500
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
asa
Aeromonas salmonicida subsp. salmonicida A449
Brite
KEGG Orthology (KO) [BR:
asa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asa03400
]
ASA_3067 (sbcC)
DNA repair and recombination proteins [BR:
asa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ASA_3067 (sbcC)
Archaeal homologous recombinant proteins
ASA_3067 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_ATPase
nSTAND3
ABC_tran
AAA_21
MeaB
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
ABO91066
UniProt:
A4SQ94
LinkDB
All DBs
Position
complement(3301178..3304930)
Genome browser
AA seq
1250 aa
AA seq
DB search
MKILSLSGENLASLTGAFTIDFTKGALGAAGLFAITGNTGAGKSTLLDAICLALYDEMPR
FIANRKHVAEVGRADDEEKLKANDVRGILSRGHASGCAEVRFRGCDGRIWLARWAVRRAR
NRSEGRFQAQERSLTDVASGQVFSGSKRELQDRIDELVGLSWEQFRRAVILPQGEFAAFL
KSSADERSALLERMTGTELYSAISIQTHERAREEQQKLAAIGQRLGDVALMDEATREQWV
AQQLGLSTGLKHEQQQRQLLQDLRDLNSRIAAQLLACEEGQTALAAAEAAHAQAAPEREE
FGRAEQAQVARADHDELARLTLEVQQQEQLIGQLGPELEQVEQTQQQAALREQQLLADKI
AAEREWGALQPELKRAQELDTRIREKSSQLQEVQQQGAQARALQVALQQEWQQQASRVQA
LEVRRQQWALWLEERKALAPLARQWQPLLAAMQDWAEGRDQLQHLLQSREHKSHALRDLN
SRLEQGQQERDYWQQERARLQQQHDQLQAQEWDGQVAKAQEQRQTQTEQLARVRQLLELA
EAGRNHSEQQERLLQEMALLEQHLTRLAIQHEELVPALERLGLQRDEARHALDQARAVAS
FEQYRHVLSDGTPCPLCGAEEHPYRQSQPQVAGILAQLAERVRQLELEWERLNHQHIQGE
SERVDLTRQLVARQQHQPELEARAEQLTQRWLQWGGETLLGHGLPLRQSPAEWADLLAHL
LAQGEALELGLVAGQRQLQQAQQGQQMLMGLRNQLTQLTTRHQQFEQQWQEAERKKIEWE
AELKALAEQEVTLRQRLVQGETRLDEQMGAEPWRQWLGSRQWLEWQQTCEAYLHGQREWE
QLGSELASLTPALSAQEARVQSQNEQLYKLERDYKEAEQQRQGLLASREACLGGRAIAEV
EGEWQQRLSRGANQLEEAVGALRAARERQTELKTRLTHLEQDKQVSSRRRREVLGRWAAH
ATRLGIAEYDLRRLLAIHPEELKARRTALQGLDDALAEARTRLAERQRALALEEVKRERY
REHHGELTALSTEALAERLGACEAHCRELEEQLFQCKSTLAQAEAAALKAGSLQEALSCQ
QAVTDHWQQLSELIGSASGAKLRTFAQSLTLERLLLEANAQLGELSPRYRLERVPGTDLA
LQVVDLDMGDEVRSVDSLSGGESFLVSLALALALSSLSSRQTQVESLFIDEGFGTLDPDS
LDLALSSLDSLQAAGRQIGVISHVQTLVERIGVQIRVEALGGGESRVVLP
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctgtccctcagcggtgagaacctggccagcctgaccggggccttcaccatc
gactttaccaagggggcgctcggcgccgcagggctgtttgccatcacgggcaacacgggt
gccggcaagagcaccttgctcgatgccatctgtctggcgctgtacgacgagatgccgcgc
tttatcgccaaccgcaagcacgtggccgaggtgggccgagcggatgacgaggagaagctc
aaggccaacgacgtgcggggcatcctcagtcgcggccacgccagcggctgtgccgaggta
cggtttcgcggctgcgatggccgcatctggctggcccgctgggcggtgcgccgggcgcgc
aaccgttccgaggggcgttttcaggcccaggagcgcagcctgaccgacgtggcgtcgggt
caggtcttctccggcagcaagcgggagctgcaggatcgcatcgatgaactggtggggctc
tcctgggagcagtttcgccgcgccgtgatcctgccccagggggagttcgccgcgtttctc
aaatcgagcgccgacgagcgctccgccctgctcgaacggatgacgggcaccgagctctat
tccgccatctccatccagacccatgaacgggcgcgggaggagcagcaaaaattggccgcc
atcgggcaacgcctcggcgacgttgcgctgatggacgaggccactcgcgagcagtgggta
gcccagcagctgggcctttccaccggcctcaagcacgagcagcagcagcgccagctgttg
caggacttgcgggacctcaacagccgcatcgccgcccagttgctggcttgcgaggagggg
cagacggcactggccgccgccgaggcggctcacgcccaggcggctcccgagcgggaggag
tttggccgcgccgagcaggcccaggtggcccgcgccgatcacgatgaacttgctcgtctc
accctggaagtgcagcagcaggagcagctcattggccagctgggtcccgagctcgaacag
gtcgagcagacccagcagcaggccgcgctgcgagagcagcaactgctggccgacaagata
gccgccgagcgcgaatggggggcgctgcaacccgaactcaagcgggcgcaggagctcgat
acccgcatcagggagaagagcagccagttgcaggaagttcagcagcagggggcgcaggcc
cgcgcgctgcaagtcgccctgcaacaggagtggcaacagcaggcgagccgggtgcaggcg
ctcgaggtgcggcgtcagcaatgggcgctctggctcgaggagcgcaaggcgctggcaccc
ctggcacgccagtggcaacccctgctggcagccatgcaggattgggccgagggacgggat
cagctgcaacatctgctgcaaagccgtgagcacaagagccatgccctgcgggatctcaac
agccggctggagcagggacagcaggagcgggactactggcagcaggagcgcgcccggctg
caacagcagcacgaccagttgcaggcgcaggagtgggatggtcaggtcgccaaggcgcag
gagcagcgtcagacccagaccgagcagttggcacgggtgcgccaattgctggagctggcg
gaggcaggccgtaatcacagcgagcaacaggagcgcttgttgcaagagatggcactgctg
gagcagcacctcacccgattggccatccagcacgaggagctggtgcctgcgctggagcga
ctcgggcttcagcgtgacgaggcgcgtcatgcgctggatcaggcccgtgccgtcgccagc
ttcgagcagtatcgtcacgtgctcagcgacggcactccctgcccgctgtgtggcgcagag
gagcatccctatcgccagagccagccgcaggtggccggcatactggcgcaactggccgag
cgagtccgtcagctggagctggagtgggagcgactcaatcatcaacatattcagggagag
agcgagcgtgtcgatctgactcgtcagctggttgcccgccagcaacaccaacccgagctg
gaggcgagagccgaacagctgacccagcgctggttgcagtggggtggtgagaccttgttg
ggccacgggctgcccttgcggcaaagccccgcagagtgggcggatctgctggcgcatctc
ttggcacagggggaggcgctggagctgggtctggtggccggacagcgacagctgcaacag
gcccagcaaggccagcagatgctgatggggctgcgcaatcagctgactcagctcacaacc
cgtcatcagcagtttgaacagcagtggcaggaggccgagcggaagaagatagagtgggag
gccgagctcaaagcgctggccgagcaggaagtcacactgcgccagcgcctggttcagggt
gaaacccggctcgatgaacagatgggggccgaaccctggcgtcaatggctcggcagccgg
cagtggctcgaatggcagcagacctgcgaggcctatctgcacggacagcgcgagtgggag
cagctgggcagcgaacttgccagcctgaccccggcgctcagtgcgcaggaggcaagggtt
cagagccagaatgaacagctgtacaagctggagcgcgactacaaggaggccgagcaacag
cgccagggactgctggccagccgcgaggcgtgtcttgggggacgtgccatcgccgaggtc
gagggcgaatggcagcagcgactttcacggggagccaatcaactcgaagaggcggtgggc
gcactgcgggccgcaagggagcgacagacagagctcaagacacggttgacccatcttgag
caggacaaacaggtgagcagtcgccgccgccgcgaggtactggggcgctgggctgcccat
gccaccaggctcgggattgccgaatatgatctgcgccgattgctggccatccatccggag
gagctcaaggcccgccgcacagccctgcaggggctggatgatgccctggccgaggcgcgt
accaggctggccgaacgccaacgggcgctggcgctggaggaggtgaaacgggagcgttat
cgcgagcatcacggcgaactgacggcgctctccaccgaggcccttgccgagcgccttggc
gcttgcgaggcccattgccgcgagctggaggagcagctgttccagtgcaagagtacgctg
gcccaggccgaggcggcggccctcaaggctggctccttgcaagaggcgctgagttgccag
caggcggtgacggatcactggcagcagttgtccgagcttatcggttccgccagcggcgcc
aagctgcgcaccttcgcccagagcctcaccctggagcgtctgctgctagaggccaatgcc
cagctcggcgagttgtcgccgcgctaccggttggagcgggtacccggcacggatctggcg
ctgcaggtggtggatctggacatgggggacgaggtgcgctctgtggactccctctccggc
ggcgagagcttcctggtgtcgctggcgctggcgctggccctctccagcctatcgtcgcgc
cagacccaggtcgagtcgctgtttatcgacgagggcttcggcaccctggatccggacagc
ctggatctcgcgctctccagcctggactcgctgcaggcggccggccgccagataggcgtc
atctcccatgtgcagaccctggtggagcggatcggtgtgcaaattcgggtcgaggccctc
ggtggtggtgagagtcgggtggtgttgccctga
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integrated database retrieval system
