Aeromonas salmonicida subsp. salmonicida A449: ASA_3547
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Entry
ASA_3547 CDS
T00500
Name
(GenBank) peptidoglycan-binding LysM
KO
K19235
L,D-transpeptidase YbiS
Organism
asa
Aeromonas salmonicida subsp. salmonicida A449
Brite
KEGG Orthology (KO) [BR:
asa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
asa01002
]
ASA_3547
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
asa01011
]
ASA_3547
Peptidases and inhibitors [BR:
asa01002
]
Cysteine peptidases
Family C82
ASA_3547
Peptidoglycan biosynthesis and degradation proteins [BR:
asa01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
ASA_3547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
ABO91515
UniProt:
A4SRJ3
LinkDB
All DBs
Position
complement(3836581..3837507)
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AA seq
308 aa
AA seq
DB search
MKLLRNSAAALCCSLVMAAAPVFAVQYDLPGANSRLVGENMEYVVPAEENGQPLEAVAAK
FQLGLTNMLEANPKADPLLLQAGERLVIPHQLILPDAPREGIVLNVAEMRLYYYPKGKKV
VEVLPIGIGQLGTDTPENWVTSVQRKKAGPTWTPTAKMHAEYAARGESLPAVWPAGPDNP
MGLFALYIGKMYAIHGTNAQFGIGLRVSHGCVRLRNEDIEYLFKQIPVGTRVQFVNQPIK
ATVEPDGRRYLEVHQPLSRSEAEFNSSLPAPLPMTQAATRFIAHADSDSQLVKQALEQRS
GMPIAINR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaagctccttcgcaatagtgcggctgctctgtgctgcagccttgttatggccgccgcg
cctgtgtttgccgttcaatacgatctgcccggggccaacagccgtctggtgggcgagaat
atggaatacgtggtgccggcagaggaaaatggccagccgctggaagccgtggccgccaaa
ttccagctggggctgaccaatatgctcgaagccaaccccaaggcggatcccctgctgctg
caggcgggtgagaggctggtcatcccccatcagctgatactgccggatgccccccgcgaa
ggcatagtgctgaacgtggccgagatgcgcctctactactacccgaaaggcaagaaggtg
gtggaagtgctgcccatcggcataggccagctcggcaccgacaccccggaaaactgggtg
accagcgtgcagcgcaagaaggcgggcccgacctggacccctaccgccaagatgcatgcc
gagtatgccgcccgtggcgagagcctgccggcagtctggcccgccggcccggacaacccc
atggggctgtttgcgctctacatcggcaagatgtacgccatccacggcaccaatgcccag
ttcggcataggtctgcgggtgagccacggttgcgtgcggctgcgtaacgaagacatagag
tacctgttcaagcagatcccggtcggcacgcgggtgcagttcgtcaaccagccgatcaag
gccaccgtcgagcccgatggtcgccgttatctggaagtgcaccagcccctgtcccgcagc
gaagccgagttcaactccagtctgcctgctccgctgcccatgacccaggccgcgacccgc
tttatcgcccatgccgacagcgactcccagctggtcaagcaggcgctggagcagcgcagc
ggcatgccgatcgccatcaatcgctga
DBGET
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