Aeromonas salmonicida subsp. salmonicida A449: ASA_4174
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Entry
ASA_4174 CDS
T00500
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
asa
Aeromonas salmonicida subsp. salmonicida A449
Pathway
asa03420
Nucleotide excision repair
asa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ASA_4174 (uvrD)
03430 Mismatch repair
ASA_4174 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asa03400
]
ASA_4174 (uvrD)
Enzymes [BR:
asa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ASA_4174 (uvrD)
DNA repair and recombination proteins [BR:
asa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ASA_4174 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ASA_4174 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ABO92113
UniProt:
A4ST91
LinkDB
All DBs
Position
complement(4466062..4468233)
Genome browser
AA seq
723 aa
AA seq
DB search
MDVSTLLDGLNDKQRDAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMQVERCSPFSIIAV
TFTNKAAAEMRGRVEKVLGSMQRGMWIGTFHGIAHRLLRAHHLDAGLPQDFQILDSDDQY
RLIRRVIKALNLDEKHWAPRAVMSYINGKKDEGLRPGDIDLYGDPVTRTYQQIYKTYQET
CDRSGLVDFAELLLRAHELWLNKPHILEHYRDRFQNILVDEFQDTNGIQYAWLRMLAGDS
GKVMIVGDDDQSIYGWRGAKIENIQRFLTDYQGAETIRLEQNYRSTANILKAANCVIANN
SERLGKELWTEGAEGDQISLYAAFNEVDEARFVVGRLKDWKEKGGLLADCAILYRSNAQS
RVLEEALMQDAMPYRIYGGLRFFERQEIKDAMAYLRLINNRGDDASFERVVNTPTRGIGD
RTLEILRTNARDQGLNLWQSAKGLLNDKVLTGRAGNAVRGFVDLIDALEEQVGMLPLHQQ
ADIAIQNSGLKAMYLAEKGEKSQARVENLDELVTACRQYNRPDELEEMSDLSAFLAHAAL
ESGENQADEYADAVQLMTLHSAKGLEFPLVLLVGVEEGMFPSQQSTEESGRLEEERRLCY
VGMTRAMEKLYICYAESRRIYGREMFHKPSRFIREMPAECLEEIRLRTQVSRPTQYGRFS
QNEVQQSFDASGITLGQRVLHPKFGEGVVLNFEGVGQQSRVQIQFDDVGAKWLVTAYARL
EAL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcaaccctgctcgacgggctcaacgacaagcaaagagacgcggtggcggcc
cctcgcagcaatctgctggtgctggcgggcgccggctcgggcaagacccgggtgctggtg
caccgtattgcctggctgatgcaggtggagcgttgctcacccttctccatcattgccgtg
acctttaccaacaaggcggcggccgagatgcgcggccgggtcgagaaggtgttgggcagc
atgcagcgcggcatgtggatcggcaccttccacggcatcgcccaccgcttgctgcgggcc
catcatctggacgcgggcctgccgcaggatttccagatcctcgactccgacgaccagtac
cgcctcatccgccgcgtcatcaaggcgctcaacttggacgagaagcactgggcccctcgc
gccgtgatgagctacatcaacggcaagaaggatgagggcttgcgccccggtgacatcgat
ctctacggcgaccccgtcacccgcacctatcagcagatctacaagacctatcaggagacc
tgcgatcgctccgggctggtggacttcgcagaactcttgctgcgcgcccacgagctatgg
ctcaacaagccccacatcctcgagcactaccgggatcgcttccagaacatactggtggac
gagtttcaggataccaacggcatccagtacgcctggctgcggatgctggcaggcgacagc
ggcaaggtgatgatcgtcggcgacgatgaccagtccatctacggctggcgcggcgccaag
atagagaacatccagcgcttcctgaccgattatcagggcgccgagaccatccgcctggag
cagaactaccgatccaccgccaatatcctcaaggccgccaactgcgtcattgccaacaac
tctgagcggctcggcaaggagctatggaccgagggggccgagggtgaccagatttcgctc
tatgccgccttcaacgaggtggacgaagcgcgcttcgtggtcggccgcctcaaggattgg
aaagagaagggcggcctcttggccgactgcgccatcctctatcgctccaacgcccagtcg
cgggtgctggaagaggcgctgatgcaggacgccatgccctaccgcatatacggcggcctg
cgcttcttcgaacggcaagagatcaaggacgccatggcctacctgcggctgatcaacaac
cgcggcgacgacgccagcttcgagcgggtggtcaacaccccgacccgtggcatcggcgat
cgcaccctcgagatcctgcgcaccaacgcccgggatcaggggctgaacctctggcaatcg
gccaagggactgctcaatgacaaggtgctgaccggtcgcgccggcaacgctgtgcgcggc
tttgtcgatctgatcgatgcgctggaggaacaggtcggcatgctgccgctgcaccagcag
gcggatatcgccatccagaattccggtctcaaggccatgtatctggcggaaaaaggcgag
aagtcccaggcacgggtagagaacctggacgaactggtcactgcctgtcgtcaatacaac
cgcccggatgagctggaagagatgagcgatctgtcagccttcctcgcccacgcggcgctg
gaatccggcgaaaatcaggcggacgaatacgccgatgcggtgcagctgatgacactgcac
agcgccaaggggctggagttcccgctggtgctgctggtgggcgtggaagagggcatgttc
cccagccagcaatcgaccgaggagtcgggccgcctggaagaggagcgccgcctctgctac
gtcggcatgacccgcgccatggagaagctctatatctgttatgccgagagtcgccgcatc
tatggccgcgagatgttccacaaaccgagccgctttatccgcgagatgcccgccgagtgt
ctggaagagatccggctgcgcactcaggtgagcagacccacccagtacggccgcttcagc
cagaacgaggtgcagcagagcttcgacgccagcggcatcacgctcggccagcgggtgctc
catccgaaattcggggaaggggtggtactcaactttgaaggggtcggccagcagagccgg
gtgcagatccagttcgacgacgtcggcgccaagtggctggtgacggcgtatgcgagattg
gaggcgctgtaa
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integrated database retrieval system
