Athalassotoga saccharophila: ATHSA_0179
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Entry
ATHSA_0179 CDS
T06407
Name
(GenBank) RNA polymerase sigma factor RpoE
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
asac
Athalassotoga saccharophila
Brite
KEGG Orthology (KO) [BR:
asac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asac03021
]
ATHSA_0179
Transcription machinery [BR:
asac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ATHSA_0179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
Xre-like-HTH
HTH_16
Motif
Other DBs
NCBI-ProteinID:
BBJ27311
LinkDB
All DBs
Position
complement(179836..180429)
Genome browser
AA seq
197 aa
AA seq
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MEEQKLIEGLKRSDSNAYSELYREYAEKIGGIARSYLGVDDVEDVVQEVFIKIYKNIKKF
RGDSSLSTWVYRITVNVCKDMLGKKQRRREILTNFGEQEDEDTKNNIREPVDDSMPSDEL
MKTLSAEEISKAIDSLSKEDKLLINLREIEGMSYEQIAEIMDKPVGTVKSRLHYARERLK
NILESKLGIEGEINDEV
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
ttggaagaacaaaaacttatagaaggtttaaagcgttctgactctaacgcatacagtgaa
ttgtacagagagtatgctgaaaaaataggtggaatcgctcgatcttatttgggcgttgat
gatgttgaagatgttgtacaggaagtcttcatcaaaatttacaagaacataaaaaaattt
cgcggagattcttcgctttcgacgtgggtttacaggatcaccgttaacgtgtgtaaggat
atgcttggaaagaagcaaaggcgaagagagattcttacaaattttggagagcaggaagat
gaagataccaagaacaacataagagaacctgtagatgattcaatgccgtctgatgaactc
atgaaaactctttcggccgaagagatatcgaaagcgatagattctctttcaaaagaggac
aaacttctcataaatttaagggaaatagaaggcatgagttatgaacagatagcagagata
atggataaacccgttggtactgttaaaagtagacttcactatgctcgggaaaggcttaag
aatatattagagagtaaattgggcatcgaaggagagattaacgatgaagtgtga
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