KEGG   Aerococcus sanguinicola: AWM72_05925
Entry
AWM72_05925       CDS       T04253                                 
Symbol
ligA
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
asan  Aerococcus sanguinicola
Pathway
asan03030  DNA replication
asan03410  Base excision repair
asan03420  Nucleotide excision repair
asan03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:asan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AWM72_05925 (ligA)
   03410 Base excision repair
    AWM72_05925 (ligA)
   03420 Nucleotide excision repair
    AWM72_05925 (ligA)
   03430 Mismatch repair
    AWM72_05925 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:asan03032]
    AWM72_05925 (ligA)
   03400 DNA repair and recombination proteins [BR:asan03400]
    AWM72_05925 (ligA)
Enzymes [BR:asan01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     AWM72_05925 (ligA)
DNA replication proteins [BR:asan03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AWM72_05925 (ligA)
DNA repair and recombination proteins [BR:asan03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     AWM72_05925 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AWM72_05925 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     AWM72_05925 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      AWM72_05925 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD PTCB-BRCT BRCT_2 RNA_ligase RUBY_RBDX
Other DBs
NCBI-ProteinID: AMB94328
UniProt: A0A109RDJ7
LinkDB
Position
1333449..1335443
AA seq 664 aa
MDAKEEIRKLTEQLNHYAYEYYVLDQPSVTDADYDQAYRRLEDLEARYPDYIQADSPTQR
VGDKLDNRFEKVQHPTPMLSLGDVFDRQELEDFMASVERGLGFMPRFVCEMKIDGLSVSI
RYQEGAYQGAATRGDGTVGEDITANVKTISAVPMRLREAQDLEVRGEIYMPKASFKQLNE
QREEAGQATFANPRNSAAGSVRQLDPKVTAQRKLNVFLYSGVFDESLGVSSQSELLARLP
ELGLRVNPNYRICQTAEEVWAYVDEVQEKRHELAYEIDGIVIKVDRFEDQEALGYTVKAP
RWAIAYKFPAEQAQTELKDIEWTVGRTGVVTPTAVMTPVLLAGSTVQRASLHNADLIQDK
DLRLGDQIIIHKAGDIIPEVVRVLEDERPADSQPYAIPETCPVCGSDLIHLEDEVALRCV
NLACPAQAKEKLYHFVSRNAMDISGVGPRLLEQLYDRDLVGDPSDLYQLDKESLLDLDKV
GDKSADNILTAIEASKANSLERLLFALGIRHVGAKAAKDLAAHLPSMEELIAADKASYLS
IDGIGEIIADSLEEFFANDEVLALIDRLRASGLNMTYLGASPESVADQDSFWQGKTVVLT
GKLDQYTRQEAKAAIEALGGKVTGSVSKNTDILVAGADAGSKLTKAQDLDVTIFTEADMV
DRLD
NT seq 1995 nt   +upstreamnt  +downstreamnt
gtggatgctaaagaagaaattcgaaaattgaccgagcaattgaaccactatgcctatgag
tactatgtcttagaccaaccgagcgtgactgatgcggactacgaccaagcctatcgacgt
ttagaggacttggaggcccgctatccagattatattcaggctgattcaccgacccaacgc
gttggggataagttagataatcgttttgagaaggtccagcaccccacgccgatgttatct
ttgggggatgtcttcgaccgtcaggaattagaagacttcatggcttctgtggaacggggt
ttaggctttatgccccgctttgtttgtgaaatgaagattgatggtctgtcggtttcgatt
cgctaccaagagggggcctaccaaggggcggctacccggggcgatggcacggtaggcgaa
gatattacggcgaatgtgaagacgatctcggccgtgccgatgcgcttgcgggaggcccaa
gacctggaagtgcgcggggagatctatatgcccaaggcttctttcaaacagttgaatgaa
cagcgtgaagaggcaggacaagccacctttgccaatccccgtaactcggcagctggttcg
gtccgccaactcgatcctaaggtcacggcccaaagaaagctgaatgtctttctttacagc
ggcgtctttgatgagtcattgggtgtctctagccagtctgaactcctggcccgtttgccc
gagctgggtttgcgggttaaccctaattaccggatctgtcagacagctgaagaagtttgg
gcttatgtggatgaggtccaggagaagcgtcatgaactcgcctatgaaatcgatggtatt
gtgattaaggtggatcgttttgaagaccaggaagctctaggttataccgtcaaggcaccg
cgctgggccattgcttacaagttcccagccgaacaagctcagaccgaattaaaggatatt
gagtggacggtagggcggactggggtcgtcactccaacagcggtgatgacgcctgttctc
ttagctggttcaacggtgcagcgggccagcctccacaatgccgacttgatccaggacaag
gacttgcgtttgggcgaccaaatcattatccataaggcaggggatatcatccccgaagtg
gtccgtgtcttagaagacgaacggccagctgatagtcagccctatgcaattcccgaaact
tgccccgtttgcggcagtgatttgatccatttagaggatgaggttgccctgcgctgtgtg
aatctagcttgtccggcccaggccaaggagaagctctaccattttgtatcccgcaatgcc
atggatatcagtggggtaggcccccgtttactagaacagctttatgaccgtgacctagtc
ggcgacccttcagacctctaccaattagataaggaaagtttactcgatctcgataaggta
ggcgataaatctgctgataatatcttgacggccattgaggcttccaaggcgaattctctg
gaacgcttgctctttgccctcggtatccgccatgtcggagccaaggccgctaaagacctg
gccgctcatcttcctagtatggaagaactgattgcagctgacaaggcctcctacctaagc
attgatgggatcggtgaaattatcgctgactcacttgaagaattcttcgcaaatgatgag
gttctagccttgattgaccgcttgcgtgcaagtggactcaatatgacttatttaggtgct
agcccggaaagcgtcgccgaccaggattccttctggcaaggtaagacagtggtgctgacc
ggcaagcttgaccagtatacgcgccaggaagctaaggcagccatcgaagccttgggtggt
aaggtaaccgggtctgtttctaagaatacggatattctcgttgctggcgctgatgcaggg
agtaagctgactaaggctcaggatttggatgtgacgatttttacagaagctgatatggtt
gaccgtctcgattaa

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