Aerococcus sanguinicola: AWM72_05925
Help
Entry
AWM72_05925 CDS
T04253
Symbol
ligA
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
asan
Aerococcus sanguinicola
Pathway
asan03030
DNA replication
asan03410
Base excision repair
asan03420
Nucleotide excision repair
asan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AWM72_05925 (ligA)
03410 Base excision repair
AWM72_05925 (ligA)
03420 Nucleotide excision repair
AWM72_05925 (ligA)
03430 Mismatch repair
AWM72_05925 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asan03032
]
AWM72_05925 (ligA)
03400 DNA repair and recombination proteins [BR:
asan03400
]
AWM72_05925 (ligA)
Enzymes [BR:
asan01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
AWM72_05925 (ligA)
DNA replication proteins [BR:
asan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AWM72_05925 (ligA)
DNA repair and recombination proteins [BR:
asan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
AWM72_05925 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AWM72_05925 (ligA)
MMR (mismatch excision repair)
DNA ligase
AWM72_05925 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AWM72_05925 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
BRCT_2
RNA_ligase
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
AMB94328
UniProt:
A0A109RDJ7
LinkDB
All DBs
Position
1333449..1335443
Genome browser
AA seq
664 aa
AA seq
DB search
MDAKEEIRKLTEQLNHYAYEYYVLDQPSVTDADYDQAYRRLEDLEARYPDYIQADSPTQR
VGDKLDNRFEKVQHPTPMLSLGDVFDRQELEDFMASVERGLGFMPRFVCEMKIDGLSVSI
RYQEGAYQGAATRGDGTVGEDITANVKTISAVPMRLREAQDLEVRGEIYMPKASFKQLNE
QREEAGQATFANPRNSAAGSVRQLDPKVTAQRKLNVFLYSGVFDESLGVSSQSELLARLP
ELGLRVNPNYRICQTAEEVWAYVDEVQEKRHELAYEIDGIVIKVDRFEDQEALGYTVKAP
RWAIAYKFPAEQAQTELKDIEWTVGRTGVVTPTAVMTPVLLAGSTVQRASLHNADLIQDK
DLRLGDQIIIHKAGDIIPEVVRVLEDERPADSQPYAIPETCPVCGSDLIHLEDEVALRCV
NLACPAQAKEKLYHFVSRNAMDISGVGPRLLEQLYDRDLVGDPSDLYQLDKESLLDLDKV
GDKSADNILTAIEASKANSLERLLFALGIRHVGAKAAKDLAAHLPSMEELIAADKASYLS
IDGIGEIIADSLEEFFANDEVLALIDRLRASGLNMTYLGASPESVADQDSFWQGKTVVLT
GKLDQYTRQEAKAAIEALGGKVTGSVSKNTDILVAGADAGSKLTKAQDLDVTIFTEADMV
DRLD
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
gtggatgctaaagaagaaattcgaaaattgaccgagcaattgaaccactatgcctatgag
tactatgtcttagaccaaccgagcgtgactgatgcggactacgaccaagcctatcgacgt
ttagaggacttggaggcccgctatccagattatattcaggctgattcaccgacccaacgc
gttggggataagttagataatcgttttgagaaggtccagcaccccacgccgatgttatct
ttgggggatgtcttcgaccgtcaggaattagaagacttcatggcttctgtggaacggggt
ttaggctttatgccccgctttgtttgtgaaatgaagattgatggtctgtcggtttcgatt
cgctaccaagagggggcctaccaaggggcggctacccggggcgatggcacggtaggcgaa
gatattacggcgaatgtgaagacgatctcggccgtgccgatgcgcttgcgggaggcccaa
gacctggaagtgcgcggggagatctatatgcccaaggcttctttcaaacagttgaatgaa
cagcgtgaagaggcaggacaagccacctttgccaatccccgtaactcggcagctggttcg
gtccgccaactcgatcctaaggtcacggcccaaagaaagctgaatgtctttctttacagc
ggcgtctttgatgagtcattgggtgtctctagccagtctgaactcctggcccgtttgccc
gagctgggtttgcgggttaaccctaattaccggatctgtcagacagctgaagaagtttgg
gcttatgtggatgaggtccaggagaagcgtcatgaactcgcctatgaaatcgatggtatt
gtgattaaggtggatcgttttgaagaccaggaagctctaggttataccgtcaaggcaccg
cgctgggccattgcttacaagttcccagccgaacaagctcagaccgaattaaaggatatt
gagtggacggtagggcggactggggtcgtcactccaacagcggtgatgacgcctgttctc
ttagctggttcaacggtgcagcgggccagcctccacaatgccgacttgatccaggacaag
gacttgcgtttgggcgaccaaatcattatccataaggcaggggatatcatccccgaagtg
gtccgtgtcttagaagacgaacggccagctgatagtcagccctatgcaattcccgaaact
tgccccgtttgcggcagtgatttgatccatttagaggatgaggttgccctgcgctgtgtg
aatctagcttgtccggcccaggccaaggagaagctctaccattttgtatcccgcaatgcc
atggatatcagtggggtaggcccccgtttactagaacagctttatgaccgtgacctagtc
ggcgacccttcagacctctaccaattagataaggaaagtttactcgatctcgataaggta
ggcgataaatctgctgataatatcttgacggccattgaggcttccaaggcgaattctctg
gaacgcttgctctttgccctcggtatccgccatgtcggagccaaggccgctaaagacctg
gccgctcatcttcctagtatggaagaactgattgcagctgacaaggcctcctacctaagc
attgatgggatcggtgaaattatcgctgactcacttgaagaattcttcgcaaatgatgag
gttctagccttgattgaccgcttgcgtgcaagtggactcaatatgacttatttaggtgct
agcccggaaagcgtcgccgaccaggattccttctggcaaggtaagacagtggtgctgacc
ggcaagcttgaccagtatacgcgccaggaagctaaggcagccatcgaagccttgggtggt
aaggtaaccgggtctgtttctaagaatacggatattctcgttgctggcgctgatgcaggg
agtaagctgactaaggctcaggatttggatgtgacgatttttacagaagctgatatggtt
gaccgtctcgattaa
DBGET
integrated database retrieval system