Candidatus Arthromitus sp. SFB-rat-Yit: RATSFB_0973
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Entry
RATSFB_0973 CDS
T01624
Symbol
SbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
asb
Candidatus Arthromitus sp. SFB-rat-Yit
Brite
KEGG Orthology (KO) [BR:
asb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asb03400
]
RATSFB_0973 (SbcC)
DNA repair and recombination proteins [BR:
asb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RATSFB_0973 (SbcC)
Archaeal homologous recombinant proteins
RATSFB_0973 (SbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
UPF0515
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BAK81535
UniProt:
G2IEG1
LinkDB
All DBs
Position
complement(1111293..1114373)
Genome browser
AA seq
1026 aa
AA seq
DB search
MIPIKLTMQAFGPYKEKETIDFSKFFEDRLFLIAGNTGSGKTMIFDAMCYALFGQPSGEY
RDASTLRSQFAAKEDVTYVEFEFSHRNKKYTITRFPEQYKISRSKEVLQRASAQIIVEDE
LINGIKNVDQKIKEVLGIDRSQFKQIVMIAQGEFRELVSADSKKRESIYRNIFNTEEFKN
IQNILKEKSLEYEKKFENSDQRIRGFLESINSINKISYDDFTIDQILSILSKDIEDYEKK
LEELKPRKEDYKNKISNNNNFLESINSLVDKNRELMSIDISSLKDEVEFLNKAKKTFLIR
DKERILENFKETRSGYTGEKEKIISDLDHHKKNLEILNKEFEEIKFYDEEIEKLRSKVID
IESLKDTVNEKENLENKIKNLENEISSIDDEVKLFKTKLDILNNKHEEMLKFNLENRDVK
DKIVHIETELLNTEEINEGFYKYECELGIYGELLDKCKKCEDEYNKISTLYEEKLRDLSK
IEDIYFRNQAGFLAKKLEDGSPCIVCGSTVHPNKATLIDSNISEDSFKKSRDEISKIEKE
REKIVTDKINLNKDVSSKANKISEIYDEILKRDKERKFINFEKFESCKDSIEQVEFSLAF
LKNLLKESKGIYDKFIKSQDEILNIEGEIKEVKLHIDEYEKIYIKKRSDVSALNTILSDK
RLRLLKYNILSVSDYSKILKQTIGNLESLINKRETINSSITKCNNEILKLQSKLDIKNKD
IEDLNFKIDENEKIFIKSLNSNEFKDVEEYQKFKITEDNYNNRNKFIEDKREEYKAIKLK
IKELERGLDNAPYKNRDELFLHIEDLTNNLKEIEECEIKYHKNKSLLENVHRSILEINKD
ILKREKLRTNLNELNKIANGNNSYKISFERYILGIYFKEIIQAANIRLLKLTNGRFLFRH
LKESIDMRSPQGLEISVFDNKTSQERRLDAVSGGESFQASLALALGLSDVVQRYSGGVSI
DTLFIDEGFGSLDSDSLQNALECLIDANDESKLIGIISHVQELKDFIKSKIEVIDSNSGS
SIKISI
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgattccaataaagctcactatgcaagcatttggaccatataaggaaaaagaaacaata
gattttagtaaattttttgaagatagactttttttaattgcgggaaatactggtagtggg
aagacaatgatatttgatgcaatgtgttatgccttatttggacaacctagtggtgaatat
agagatgcttctactctaagaagtcaatttgcagctaaagaagatgtaacatatgttgaa
tttgaattttctcatagaaataagaaatatacaataactagatttcctgaacaatataag
atttcaagaagtaaggaggttttgcagagggctagtgcacaaattatagttgaggatgag
ttgataaatggaattaaaaatgttgatcaaaaaattaaagaagttttgggaattgatcgc
tctcagtttaaacaaattgttatgatagctcaaggagaatttagggaacttgtatctgca
gattcaaaaaagagagagagtatatatagaaatatatttaatacagaggaatttaaaaat
attcaaaatattttaaaagagaagtcacttgagtatgaaaagaaatttgaaaattctgat
cagagaataagaggatttttagaatcgattaactcaataaataaaatatcatatgatgat
tttacgatagatcagatattgagtattttaagtaaagatatagaagattacgagaaaaag
ttagaagagttgaaaccaaggaaggaagattacaaaaataaaatttcaaataacaataat
tttcttgagagtattaattctttggtagataaaaatagagaattgatgtcaattgatata
agttcattaaaagatgaagttgaatttttgaataaggcaaaaaagacatttttaataaga
gacaaagagaggattttggaaaattttaaggaaacgaggagtggatatacaggagagaag
gagaagataatttcggatttagatcatcataaaaagaatttagaaattttaaataaggag
tttgaagaaataaaattttatgatgaagagattgaaaaattaagaagtaaggttatagat
attgaatctttaaaggatactgtaaatgaaaaggaaaatcttgaaaataaaattaaaaac
ttagaaaatgaaatttcatcaattgatgacgaagtgaaattatttaaaacaaaattagat
attcttaataataaacatgaagaaatgttaaaatttaatcttgagaatagggacgtaaaa
gataaaattgtacatattgaaacagaattattaaatacagaggaaataaacgaaggattt
tacaagtatgaatgcgagcttggaatatatggcgagttacttgataaatgtaaaaaatgc
gaggatgagtacaataaaatttctactttgtatgaagaaaagttaagggatctttcaaaa
attgaagatatttattttagaaatcaggcaggatttcttgcaaaaaagcttgaagatgga
tcgccatgtattgtttgtggttcaacagttcatccaaataaagcaactcttattgatagc
aacataagcgaagattcttttaaaaaatcaagagatgaaatttcaaagatagaaaaggaa
agagagaagatagtaactgataagattaatttaaacaaagatgtaagttcaaaggctaat
aagataagtgaaatctatgatgaaattttaaaacgagataaagaaaggaaatttataaat
tttgaaaaatttgaatcatgtaaagattctatagaacaagttgaatttagtttagctttt
cttaaaaatttgcttaaagagagtaaaggtatatatgataagttcataaaatctcaggat
gaaattttaaatatagagggtgaaattaaagaagtaaaattacatattgatgagtatgag
aaaatttatattaaaaaacgaagtgatgtatctgctttaaatacaattttaagtgataaa
agattgaggttattaaaatacaatattttatcagtgagtgattattcaaaaattttaaaa
cagacaatcgggaatttggaaagtttaattaataaaagagaaactataaattcaagcata
actaaatgtaacaatgaaattttaaaacttcaatccaaattagatataaaaaataaagat
atagaggatttgaattttaagattgatgagaatgaaaaaatatttataaagtctttaaat
tcaaatgaatttaaagacgtagaagagtaccaaaaattcaaaataacagaggacaactat
aataatcgaaataaatttatagaagataaaagagaagaatataaagctattaaattaaag
ataaaagagcttgaaagagggttagataatgcaccatataaaaatagagatgaattattt
ttgcatatagaagatttaaccaataatttaaaggaaattgaagagtgcgaaataaaatac
cataaaaataaatctttgcttgaaaatgtacatagaagcatcttagagataaataaagat
attttgaaacgtgaaaaattaaggacaaatttaaatgagctaaacaaaattgcaaatggg
aataatagttataaaattagttttgagagatatatacttggaatttattttaaagaaata
atacaagctgcgaacataagacttttaaagttgacaaatggaagatttttgtttagacat
ctaaaagagagtatagatatgagaagtccacaaggattagaaattagcgtatttgataat
aaaacttcccaagaaagaagacttgatgcagtttcaggaggggaaagctttcaggcttca
cttgctttggcattaggattatcagatgtagtacaaagatattcaggaggagtttctata
gatacattatttattgatgaaggatttggatctttggattctgattcacttcaaaatgct
ctagagtgtttaatagatgctaatgatgaatcaaaacttattggaataatttcacacgtt
caggaactcaaggattttataaaatctaagatagaagtgatagactcaaatagtggaagt
agtataaagattagtatttga
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