Hoyosella subflava: AS9A_0821
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Entry
AS9A_0821 CDS
T01514
Name
(GenBank) DNA repair helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
asd
Hoyosella subflava
Pathway
asd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
asd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AS9A_0821
09124 Replication and repair
03420 Nucleotide excision repair
AS9A_0821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asd03021
]
AS9A_0821
03400 DNA repair and recombination proteins [BR:
asd03400
]
AS9A_0821
Enzymes [BR:
asd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AS9A_0821
Transcription machinery [BR:
asd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AS9A_0821
DNA repair and recombination proteins [BR:
asd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AS9A_0821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
AEF39273
UniProt:
F6EM67
LinkDB
All DBs
Position
complement(851588..853255)
Genome browser
AA seq
555 aa
AA seq
DB search
MTDGPLIVQSDKTLLLEIEHPLSEQARSAIAPFAELERAPEHVHTYRVTPLALWNARAAG
HDAEQVVDALVRFSRYPVPQPLLVDIVDTIARYGRLQLVKHPAHGLTLVSLDRAVLTEVL
RHKKIAPMLGAKVDDDTVIVHPSERGRLKQMLLKIGWPADDLAGYVDGEAHAIALETHGE
WELRDYQRMAANSFWDGGSGVVVLPCGSGKTIVGAAAMAKAQATTLILVTNTVAGRQWKR
ELLARTSLKEEEIGEYSGEKKEIRPVTIATYQVITRRTKGEYKHLELFDSRDWGLVIYDE
VHLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFALIGPKRYDAPWKDIEAQGWIA
PADCIEVRVTLTEAERMAYAVAEPEERYRLCSTAHTKVAVVKAILDKHPDAPTLVIGAYI
DQLEELGAELDAPVIQGSTRNKEREALYDAFRRGEIQTLVVSKVANFSIDLPEASVAVQV
SGTFGSRQEEAQRLGRLLRPKKDGHQAHFYSVVSRDTLDTEYAAHRQRFLAEQGYAYRIV
DADDLLGPAIGGLTG
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacggtccgctgatcgttcagtccgacaaaacgctgctactggagatcgaacat
cccctgtcggagcaggcgcggtcggcgatcgcgccgttcgctgaattggagcgcgcgcct
gagcatgtacacacgtatcgggtgacgccgctggcgctgtggaatgcacgcgctgcgggc
catgacgctgagcaggtggtcgacgcgctcgtccgcttctcccgctacccggtgccgcag
ccgctcctcgtggacattgtggacacgatcgcccgttacggtcggctgcaactggtgaag
caccccgcgcacgggctcacgctcgtcagtctggaccgcgcggtcctgaccgaggtgctg
cgccataagaagatcgcccccatgctcggggcaaaggtcgacgacgacaccgtcatcgtg
catccgagcgaacgcggacgcctcaagcagatgctgctgaagatcggctggcctgccgat
gaccttgccgggtacgtcgacggcgaagcccacgcgatcgccctcgaaactcacggcgaa
tgggagctgcgcgattatcagcggatggccgcgaactcattctgggatggcggttccggc
gtggtggtcctcccctgcggctccggtaagacaatcgtcggcgctgcagcgatggcgaaa
gcgcaggcgacgaccctgattctggtgacgaacacggtcgcgggacgtcagtggaagcgt
gaactgctcgcccgcacttcgctgaaggaagaggaaatcggcgagtactcgggtgagaag
aaggaaatccgtccggtcacgattgcgacgtatcaagtgatcacccggcgcaccaaaggt
gaatacaagcacctggaattgtttgattcgcgtgactggggcctcgtgatctacgacgag
gtgcacctactgcctgcaccggttttccggatgactgcggacctgcagtcgcggcggcgg
ctcggcctcacagcgacgctcgtgcgtgaagacggacgagagggtgacgtgtttgccctg
atcggaccgaaacgctacgacgccccgtggaaggacatcgaagcccagggctggatcgcg
cctgcggactgcatcgaggtgcgcgtcaccctgactgaggcggaacgcatggcctatgcg
gtggccgagccagaggagcggtaccggttgtgctccaccgcgcacaccaaagtggcggtg
gtgaaggcgattctggacaagcatcctgacgctccaacgctggtcatcggtgcctatatc
gaccagctcgaagagctcggcgctgaactcgatgcacctgtcatccagggttcgacacgc
aacaaggagcgggaagcgctgtacgacgcgttccgccgcggtgagatccagacacttgtc
gtcagcaaggttgcgaacttctccatcgacctccccgaggcctccgtggccgtgcaggtt
tctggcacgttcggttcgcgtcaggaagaggcacagcgactgggacggctgctgcgcccg
aagaaagatgggcaccaggcgcacttctattccgtggtttcgcgagacactctggacacc
gaatatgcggcccaccggcagcgttttctcgccgagcaggggtacgcgtaccgaatcgtc
gacgcagatgacctgcttggaccagcaatcgggggcctcaccggctag
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