Hoyosella subflava: AS9A_1285
Help
Entry
AS9A_1285 CDS
T01514
Symbol
dnaQ
Name
(GenBank) Putative DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
asd
Hoyosella subflava
Pathway
asd03030
DNA replication
asd03430
Mismatch repair
asd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AS9A_1285 (dnaQ)
03430 Mismatch repair
AS9A_1285 (dnaQ)
03440 Homologous recombination
AS9A_1285 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asd03032
]
AS9A_1285 (dnaQ)
03400 DNA repair and recombination proteins [BR:
asd03400
]
AS9A_1285 (dnaQ)
Enzymes [BR:
asd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AS9A_1285 (dnaQ)
DNA replication proteins [BR:
asd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AS9A_1285 (dnaQ)
DNA repair and recombination proteins [BR:
asd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AS9A_1285 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
UVR
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AEF39737
UniProt:
F6EFC4
LinkDB
All DBs
Position
complement(1333108..1334874)
Genome browser
AA seq
588 aa
AA seq
DB search
MSPVSTFAPSRQSPASIASGDGGTQLSFEELGTTLRDITFVVVDLETTGGSSDSDRITEI
GAVKIQGGEVLGEFATLVNPERDIPPYVVQITGITSAMIYQAPTIREVMPGFLEFARGTV
LVAHNAGFDMSFLKAAAQRCDLAWSFPRPVCTVKLARRILSKDEAPSVKLSALADLFRVP
HRPTHRALDDARATVDVLHALFERVGNKGIHSLGELTEYYPSVPSVVREKRDLARHLPET
PGVYIFRGPSNEALYVGTATNLRARVRSYFTGSEQRTRMREMVALAEGVDHVACSIPLEA
GVRELRLLAAHAPPYNRKSKWPQRAWWVTLTDEPFPRLSVTRTPHSQSVGPFPNRGTATD
AAHTLAESAGLRTCTRRLTERDLHGSHCPPAPVGGCPAARDGLLAATAYRATALRVAEVL
AGMRDDPLTELQNRIAQLAVDEKFETAARLRDRAAHLGLALHRSHRMSALTSIEEIVAGR
PDGRGGWELAIIRHGRLAAAGRAPRGSSPLQLVDLLTHTAETVLPDGTPLSGTHPEEVGL
LIKWLSEPGARIVRTTHGYCEPAHGAGKHLAWCKRARSSAREAHSLIG
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgagtccggtttccaccttcgcgccaagtcgccagagccccgcctcgatcgcatccggc
gacggcggaacgcagctgagttttgaagaacttggaacgacgttgcgtgacatcaccttc
gtcgtcgtggatctcgagactactggcggcagctccgacagtgaccggataacggaaatc
ggtgcagtcaaaattcagggcggcgaggtgcttggcgagttcgcgacgctggtcaatccg
gagcgggacattccgccctacgtcgtccagataactggcatcacgtccgcgatgatctac
caagcgccgacgatccgcgaggtgatgcccggctttcttgagttcgcgcggggcaccgtc
ctggttgctcacaacgccggtttcgacatgagcttcctcaaggcggctgcgcagcgctgt
gacctagcctggtcgttccctcgacctgtatgcactgtcaaactcgcccggaggatcctg
tccaaagacgaggcgccatccgtcaaactctctgcgctggccgacctgtttcgcgttcca
caccgtcccactcacagggccctcgacgacgcccgggcgacagtagacgttctgcacgct
ctattcgagcgggtcggtaataaagggatccatagccttggggaactgacggagtactac
ccatcagtcccctcagttgtgcgcgagaaacgcgaccttgcccgccacctcccggaaacg
ccaggcgtctatatcttccgcggaccgtcgaacgaagcgctctatgtcggaaccgccacc
aaccttcgcgctcgggttcggtcctacttcactgggtcggagcagcggacccgcatgcgg
gaaatggtggcactcgcggaaggcgtcgatcacgtcgcctgttccatcccccttgaagcc
ggggtacgcgagttgcggttacttgccgctcacgcgcctccatataaccggaagtcgaag
tggccgcagcgcgcgtggtgggtcacgctgacggacgagccattcccgcgactatccgtg
acgcggacgccacattcccaatcggtcggcccgttcccgaaccgaggtaccgcgacagat
gcggcacacactctcgcggagagtgcgggcctgcgaacctgcactcgtcgacttacggaa
cgtgatcttcacggctcgcactgtccccccgcccccgtcggcggctgcccagcagccagg
gatggtctgctcgctgccaccgcataccgcgccaccgcacttcgggttgcggaagtgctc
gcagggatgcgtgatgaccccctcactgaactgcagaacaggattgcccagctcgctgtt
gatgagaagttcgaaaccgctgcccggctacgtgacagggccgcacacttagggcttgcg
ttgcaccgcagtcatcgtatgtcggcccttacctcgatcgaggagatcgtggcggggcgg
cccgatggtcgcggcggctgggagctcgcgatcatccgccatggacgtctcgcggcggca
ggccgtgcgccccgcggctcgtcaccgttacagctagtcgacttgttgacgcacaccgcg
gaaaccgtgctgcctgacggaacaccactaagcggcacgcatcctgaagaggtgggactg
ctcattaagtggctgagcgagcctggcgcgcgaattgtgcggacaacgcacggctactgc
gagcccgcccacggtgcgggcaagcatctcgcgtggtgcaagcgggcccgatcgagtgcc
cgcgaggcccactcactcatcggttaa
DBGET
integrated database retrieval system
