Hoyosella subflava: AS9A_3394
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Entry
AS9A_3394 CDS
T01514
Symbol
sbcC
Name
(GenBank) ATP-dependent dsDNA exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
asd
Hoyosella subflava
Brite
KEGG Orthology (KO) [BR:
asd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asd03400
]
AS9A_3394 (sbcC)
DNA repair and recombination proteins [BR:
asd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AS9A_3394 (sbcC)
Archaeal homologous recombinant proteins
AS9A_3394 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
SMC_N
AAA_15
DUF5798
AAA_21
DUF724
ABC_tran
UPF0242
AAA_22
AAA
Med9
TsaE
Motif
Other DBs
NCBI-ProteinID:
AEF41835
UniProt:
F6EQ14
LinkDB
All DBs
Position
complement(3467859..3470879)
Genome browser
AA seq
1006 aa
AA seq
DB search
MRLHTLRIEAFGPFADVETIDFDSVGADGLFLLHGQTGAGKTTILDAIAFALYGAVPGAR
TESKRFLSDHAREGAIPRVTLEASVKGRRFRIVRNPEYDRPKKRGDGSVKEKAKAVLTWL
EPDGTPGRGENLARIEEIADTVRDLLGMSKDQFFQVVLLPQGEFAKFLRASNEEREKLLE
SLFETKRFGSVEAWFADRRKEAEARLDRARQCVDVVLGKITHAAGIEDEPDGNPRDWIEQ
LRDFLCQRVKTAAASLDQTATAFDQAQHRLDGVRVHAERQLRFRDAESALSKLTAGEALR
RDLATELHRARRAKPFETADRDLMRFQQAADDAVLEMKLAVDELTVLNGGAAVAEALSWP
AQACDDTNLQEAVTSWTEESGGLTKLCERADEADRLERDISRLDEALATIDDERTQLVTE
LDGIPAKKGRLDQDIDEAVAAEARIEGLRTGIHQLKKTRSAAHELPGVSEALIDAQDALI
RARSNHLESRERLVALRELRIAGMAGELANRLEAGEPCAVCGSEIHPKPAPFAPTAVTQE
DEQRAVDSEQLAADAFEAARVAVADLEKRAELLGGESGGRSLRDIDAELTEATASLAEAQ
RCVGQLGGLRSAREKLLGRARALEERISELSSKRAGLEERVDGLTTQLAELRATLDAARG
EDTDVVSRKARLDALARAASHLHGTRGKAAAAVLRTEEHHAYLQSLAREAGFQSLTDARN
AVRTVPWIADTEAALEDARDRKVRAQAVLDDPLVRDAANQPTANVEAAETDVAEARAALE
SAVREHAQAQRANDGVISLAGDLESALEDLGPAEERYAQLSLLSEVIAGRGQNTRRMSLR
SYVLAARLEEVAVAASARLRIMSGGRYEFIHSDAAGPRGLRGGLGLDIRDDYTGVVRSAK
TLSGGETFMASLSLALGLADVVTSEAGGMMLDTLFIDEGFGTLDSDTLDAVMGVLDELRA
GGRVVGIVSHVDEMRQRIPCRLHVVKTRTGSHVRSSVTALPEAPVG
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctgcatacgctgcgcatcgaggcttttgggccttttgccgatgtcgagaccatt
gacttcgattcggtgggggccgacggcttgttcctgctgcacggccagaccggggccggc
aagacgacaatcctcgacgcgatagctttcgccctctacggggcggttccaggggcacgc
actgaaagtaagcggtttctctcagatcacgcacgcgaaggcgcgataccgagagtcacc
cttgaggctagcgtcaaaggccgacggttccgcatcgtcagaaaccccgaatatgaccgc
cccaagaagcggggtgatgggtccgtaaaggagaaggcgaaggcggtgctcacctggctg
gaaccggatgggaccccggggcgcggtgagaatctggcgcggatcgaagagatcgcggat
acggtccgtgacctccttggaatgtccaaggatcagttcttccaggttgttctcctaccc
cagggtgagttcgccaagttcctccgggcgtcgaatgaagagcgggagaagctacttgaa
agcctcttcgaaacgaaacgtttcggctccgtggaggcttggttcgccgatcgccggaag
gaagctgaggcgcgtctcgaccgtgcgcgtcagtgtgtggacgtcgttctgggaaagatc
actcacgccgctggcattgaagacgagccggatgggaatccgcgcgactggatcgaacag
ctgagagattttctctgccagcgtgtcaagacggcggcggctagtctcgatcagaccgca
accgcttttgaccaggcgcagcaccgactcgatggtgtccgcgtccacgcggaacgtcaa
ctgagattccgcgatgccgaatccgcactgagcaagctcaccgcgggtgaggcccttcgt
cgtgatctcgcgaccgaactgcatcgagcgcggcgggctaaacctttcgagacagcggac
agagatctgatgcggttccagcaggctgccgatgatgctgtgctcgaaatgaaacttgcc
gtagacgaactcacagtactgaacggtggcgccgccgtcgctgaagcactctcctggcca
gcgcaagcgtgcgacgacacgaacctgcaggaggcagtcacttcctggaccgaggaaagc
ggtgggctgacgaagctctgcgagcgcgctgacgaggccgaccgcctcgagagggacatc
tcgcgtctcgacgaagcgttggcaacaatcgacgatgagcgcactcagctggtgactgaa
ctcgacggaataccagccaaaaaaggtcggctcgaccaggacatcgacgaagccgttgcg
gccgaggcgcggattgagggtctccgtaccggcattcatcaactgaagaagactcgttcg
gcggctcatgaactccccggtgtgagcgaagcactcatcgatgcgcaggacgcgctcatc
cgcgctcgatcgaatcaccttgagagccgggagcgtctcgttgcgcttcgcgagctcaga
attgccgggatggcaggggaacttgcgaatcgcctggaagctggtgaaccgtgcgcggta
tgcgggtcggagatccatccgaagcccgctccgttcgcaccgactgccgtcacgcaagaa
gacgagcagagggcagtcgattccgagcaactcgctgcagacgctttcgaggccgcgaga
gtagcggtcgctgaccttgagaaacgcgcagaattgctcggcggtgaatccggcggtcgc
tccttgcgggacatcgacgcagagttgactgaggccacggcttcgctggccgaagctcag
cgatgcgtcggtcaacttggcgggctccgatctgcacgtgagaaactgctcggccgtgcg
cgcgcacttgaggaacgaatctccgaactgtcgtcgaagcgggctggacttgaggagcgg
gtcgacgggcttaccacccagctagcggagttgcgggcgaccctcgacgcggcacgcggg
gaagacaccgatgtcgtttcgaggaaggcacggctcgacgctcttgcgcgagcagcctcg
cacctacatgggacacggggcaaagcagcagctgcggtgctccgcactgaggaacaccat
gcttatctgcagagcctagcgagggaggcgggcttccagtcgctcacggacgcgcggaac
gccgtgcgaacggtgccgtggatagctgacacggaagccgccctcgaggacgcccgggat
cgcaaagtgcgtgcccaagcggtccttgacgacccactagtcagagatgctgccaatcag
ccgaccgccaacgtcgaggccgcggagaccgatgtcgccgaagcgcgcgctgcgctcgag
tcggcagtccgggaacatgcgcaagctcagcgggcgaatgacggagttatctcgctcgca
ggcgatctcgagtctgctctcgaggacctgggcccagcggaggaacggtacgcgcaacta
tcgctgttgtctgaggtcattgcaggccgaggccagaacacgcgccgaatgtcgctgcgg
tcctacgtgctggcggctcgccttgaggaagttgcggtagcggcatcggcgcggctacgc
atcatgtcaggcggcaggtacgagttcattcattcagacgcagcaggtccacgaggcctt
aggggcggactcggcctcgacatccgagatgactacaccggggtcgttcggtcagcgaag
acactgtccggcggcgaaaccttcatggcgtcattgtcgctggcactgggactggccgat
gtggtgacttccgaagcgggcggcatgatgctcgacaccctcttcatcgacgaaggcttc
ggcacactcgatagcgacacacttgacgcggtgatgggcgttctcgacgaactccgcgca
ggcggccgagtcgtcggcatcgtcagccatgtcgatgagatgcgccagcgcatcccctgc
cgcctccatgtcgtgaagactcgaactggttctcacgtgcgctcgtccgtcactgcgctc
cccgaagcaccagtcggttag
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integrated database retrieval system
