KEGG   Candidatus Arthromitus sp. SFB-mouse-Japan: SFBM_0598
Entry
SFBM_0598         CDS       T01591                                 
Name
(GenBank) primosome assembly protein PriA
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
asf  Candidatus Arthromitus sp. SFB-mouse-Japan
Pathway
asf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:asf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SFBM_0598
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:asf03400]
    SFBM_0598
Enzymes [BR:asf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SFBM_0598
DNA repair and recombination proteins [BR:asf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SFBM_0598
SSDB
Motif
Pfam: DEAD PriA_C ResIII PriA_3primeBD Helicase_C PriA_CRR AAA_30 PIF1 T2SSE SLFN-g3_helicase AAA_16 zf-CHY zinc-ribbons_6 NB-ARC AAA_11 AAA_19
Other DBs
NCBI-ProteinID: BAK56376
UniProt: F9VJW4
LinkDB
Position
647523..649745
AA seq 740 aa
MSKYAKVIIQSISDKLDKFFTYIIPDEMKDEVSLGSVVKLHFGFNKKLVFGFVFEILDEE
DLFEDDKKYLDKIKSLNSIDKRFHLNNDSLELIKYIRNKYLSSYYEAISLFIPSKFLDDA
SLKIKDYLYLDCEVAVPERFKKDPYISIMEFVFSNPNVYDKNELSKINNFSKSSISTLIK
HGILKINSKERSILPSFRDSTYTKKHLNDEQKTVYNEVIHGDEKIFLVHGVTGSGKTEVY
LSIFKNFVSRGYDCLILVPEISLTPQMIDRVREQFDNDVVIYHSKLTTNERFTEWQKINS
GKVKVAIGTRSALFLPFKNLGCIVIDEEHEGTYKSDSDPKYLVRDIAVKYSELKDDLKIV
LGSATPSIESYTMAKNRKYKLLTIKNRVNNRSFPNVFAVNMKDELKCGNKSIFSRLLYDK
INDRISKSEQVILFINKRGFSSFVSCRACGYVYKCKYCDITLTYHGNNSHLICHYCGYAQ
AMSNICVECGSNYVKHFGIGTEKVEFITKKIFQNARVLRMDFDTTRRKDSYSKFYDEIKN
KNVDIVIGTQMIAKGFDFEDVTLVGVLAADLSMNVPDYKAYERTFQLLNQVSGRSGRGSK
LGEVCIQTYNPENYVIKHSMNNDYESFYNDEIKLRKILDYPPFVDILNILFQAKDENLYT
EVLIPLYRELKSKFGIKYQILGPSSCMISKINDYYRWQIIFKGDQDNETYNNIKVLINDK
LSNVKSKYKISFDVNPYSIF
NT seq 2223 nt   +upstreamnt  +downstreamnt
atgagtaagtatgcaaaagtaattatacaatctataagtgataagttagataaattcttt
acatatataataccagatgagatgaaggatgaagtttctttaggaagtgttgtgaagctt
cattttggatttaataagaaattagtttttggatttgtttttgagatattagatgaggaa
gatttatttgaagatgataaaaagtatttagataaaataaagagtttaaattctattgac
aagagatttcacttgaataacgattcattggagcttattaaatatattcgaaataaatat
ttatcttcttattatgaagctatatctttatttataccttcaaagtttttagatgatgca
agtttaaagataaaggattatttgtacttggattgtgaggttgctgttcctgaaagattt
aagaaagatccatatataagcataatggaatttgtttttagcaatccgaatgtttatgat
aaaaatgaattaagtaagattaataatttttctaagagctctatatctactctcataaaa
catggaatattgaagattaattctaaagaaaggtctatattaccatcttttcgagattca
acttatacaaaaaaacaccttaacgatgaacaaaaaacagtttataatgaggttatacat
ggagatgagaagattttcttagttcatggggttactggtagtggcaagacggaagtttat
ttatcaatatttaaaaattttgttagtagaggttatgattgtttaatacttgtaccagaa
atttctcttactcctcaaatgattgatagagtgagagaacagtttgataatgatgtagtt
atatatcacagtaagttaactactaatgaacgttttactgagtggcaaaaaattaatagt
ggtaaagttaaggttgctataggaactcgttcagctttatttttgccttttaaaaatttg
ggatgtattgtaattgatgaggaacatgagggtacatataagtctgatagtgatccaaag
tatttggtgagagatattgctgttaaatattctgaacttaaggatgatttaaagattgta
cttggatcagcaacaccaagtatagaatcgtatactatggcaaaaaatagaaaatataaa
cttttaaccattaaaaatagagttaataatagaagtttcccaaatgtttttgctgttaat
atgaaagatgaacttaagtgtgggaacaaatctatttttagtagacttttgtatgataag
ataaatgataggatctctaagtctgaacaagtaatattgtttattaataagcgtggtttt
tccagttttgtttcatgtagagcttgcggatatgtatacaaatgtaagtattgtgatata
acattgacataccatggtaataatagtcatttgatatgtcattactgtggatatgcacaa
gctatgagtaacatatgcgtggaatgtggaagtaactatgtcaaacattttggaattggt
acagagaaagttgagtttataactaaaaagatatttcagaatgctagagttttaagaatg
gattttgacacgactagaagaaaggattcatattctaaattttatgatgaaattaaaaac
aagaatgtcgatattgttattggaactcaaatgattgccaaaggatttgattttgaagat
gttactcttgtcggtgttttagcggcagatttgagcatgaatgttccggattataaagct
tatgaaagaacatttcaacttttgaatcaggtttctggaagatctggtagaggatcaaaa
ttgggtgaagtatgtatacaaacatataatccagagaattatgttataaaacattcaatg
aataatgattatgaatcattttataatgatgaaattaagctcagaaagatacttgattat
ccaccatttgtggatatattaaatatattattccaagcaaaagatgaaaatttatatact
gaagttcttattcccttatatagggaacttaaaagtaagtttggaataaaatatcaaatt
ttaggtccttcatcttgtatgatatctaaaattaatgattattataggtggcagattatt
tttaaaggggatcaggataatgaaacctataataatataaaggttttaatcaatgataaa
ttgagtaatgtaaaatctaaatataaaattagttttgatgtaaatccatattcaatattt
taa

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