Candidatus Arthromitus sp. SFB-mouse-Japan: SFBM_0598
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Entry
SFBM_0598 CDS
T01591
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
asf
Candidatus Arthromitus sp. SFB-mouse-Japan
Pathway
asf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SFBM_0598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asf03400
]
SFBM_0598
Enzymes [BR:
asf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SFBM_0598
DNA repair and recombination proteins [BR:
asf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SFBM_0598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
ResIII
PriA_3primeBD
Helicase_C
PriA_CRR
AAA_30
PIF1
T2SSE
SLFN-g3_helicase
AAA_16
zf-CHY
zinc-ribbons_6
NB-ARC
AAA_11
AAA_19
Motif
Other DBs
NCBI-ProteinID:
BAK56376
UniProt:
F9VJW4
LinkDB
All DBs
Position
647523..649745
Genome browser
AA seq
740 aa
AA seq
DB search
MSKYAKVIIQSISDKLDKFFTYIIPDEMKDEVSLGSVVKLHFGFNKKLVFGFVFEILDEE
DLFEDDKKYLDKIKSLNSIDKRFHLNNDSLELIKYIRNKYLSSYYEAISLFIPSKFLDDA
SLKIKDYLYLDCEVAVPERFKKDPYISIMEFVFSNPNVYDKNELSKINNFSKSSISTLIK
HGILKINSKERSILPSFRDSTYTKKHLNDEQKTVYNEVIHGDEKIFLVHGVTGSGKTEVY
LSIFKNFVSRGYDCLILVPEISLTPQMIDRVREQFDNDVVIYHSKLTTNERFTEWQKINS
GKVKVAIGTRSALFLPFKNLGCIVIDEEHEGTYKSDSDPKYLVRDIAVKYSELKDDLKIV
LGSATPSIESYTMAKNRKYKLLTIKNRVNNRSFPNVFAVNMKDELKCGNKSIFSRLLYDK
INDRISKSEQVILFINKRGFSSFVSCRACGYVYKCKYCDITLTYHGNNSHLICHYCGYAQ
AMSNICVECGSNYVKHFGIGTEKVEFITKKIFQNARVLRMDFDTTRRKDSYSKFYDEIKN
KNVDIVIGTQMIAKGFDFEDVTLVGVLAADLSMNVPDYKAYERTFQLLNQVSGRSGRGSK
LGEVCIQTYNPENYVIKHSMNNDYESFYNDEIKLRKILDYPPFVDILNILFQAKDENLYT
EVLIPLYRELKSKFGIKYQILGPSSCMISKINDYYRWQIIFKGDQDNETYNNIKVLINDK
LSNVKSKYKISFDVNPYSIF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagtatgcaaaagtaattatacaatctataagtgataagttagataaattcttt
acatatataataccagatgagatgaaggatgaagtttctttaggaagtgttgtgaagctt
cattttggatttaataagaaattagtttttggatttgtttttgagatattagatgaggaa
gatttatttgaagatgataaaaagtatttagataaaataaagagtttaaattctattgac
aagagatttcacttgaataacgattcattggagcttattaaatatattcgaaataaatat
ttatcttcttattatgaagctatatctttatttataccttcaaagtttttagatgatgca
agtttaaagataaaggattatttgtacttggattgtgaggttgctgttcctgaaagattt
aagaaagatccatatataagcataatggaatttgtttttagcaatccgaatgtttatgat
aaaaatgaattaagtaagattaataatttttctaagagctctatatctactctcataaaa
catggaatattgaagattaattctaaagaaaggtctatattaccatcttttcgagattca
acttatacaaaaaaacaccttaacgatgaacaaaaaacagtttataatgaggttatacat
ggagatgagaagattttcttagttcatggggttactggtagtggcaagacggaagtttat
ttatcaatatttaaaaattttgttagtagaggttatgattgtttaatacttgtaccagaa
atttctcttactcctcaaatgattgatagagtgagagaacagtttgataatgatgtagtt
atatatcacagtaagttaactactaatgaacgttttactgagtggcaaaaaattaatagt
ggtaaagttaaggttgctataggaactcgttcagctttatttttgccttttaaaaatttg
ggatgtattgtaattgatgaggaacatgagggtacatataagtctgatagtgatccaaag
tatttggtgagagatattgctgttaaatattctgaacttaaggatgatttaaagattgta
cttggatcagcaacaccaagtatagaatcgtatactatggcaaaaaatagaaaatataaa
cttttaaccattaaaaatagagttaataatagaagtttcccaaatgtttttgctgttaat
atgaaagatgaacttaagtgtgggaacaaatctatttttagtagacttttgtatgataag
ataaatgataggatctctaagtctgaacaagtaatattgtttattaataagcgtggtttt
tccagttttgtttcatgtagagcttgcggatatgtatacaaatgtaagtattgtgatata
acattgacataccatggtaataatagtcatttgatatgtcattactgtggatatgcacaa
gctatgagtaacatatgcgtggaatgtggaagtaactatgtcaaacattttggaattggt
acagagaaagttgagtttataactaaaaagatatttcagaatgctagagttttaagaatg
gattttgacacgactagaagaaaggattcatattctaaattttatgatgaaattaaaaac
aagaatgtcgatattgttattggaactcaaatgattgccaaaggatttgattttgaagat
gttactcttgtcggtgttttagcggcagatttgagcatgaatgttccggattataaagct
tatgaaagaacatttcaacttttgaatcaggtttctggaagatctggtagaggatcaaaa
ttgggtgaagtatgtatacaaacatataatccagagaattatgttataaaacattcaatg
aataatgattatgaatcattttataatgatgaaattaagctcagaaagatacttgattat
ccaccatttgtggatatattaaatatattattccaagcaaaagatgaaaatttatatact
gaagttcttattcccttatatagggaacttaaaagtaagtttggaataaaatatcaaatt
ttaggtccttcatcttgtatgatatctaaaattaatgattattataggtggcagattatt
tttaaaggggatcaggataatgaaacctataataatataaaggttttaatcaatgataaa
ttgagtaatgtaaaatctaaatataaaattagttttgatgtaaatccatattcaatattt
taa
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