KEGG   Actinobacillus suis H91-0380: ASU2_03580
Entry
ASU2_03580        CDS       T02262                                 
Name
(GenBank) DNA topoisomerase I subunit omega
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
asi  Actinobacillus suis H91-0380
Brite
KEGG Orthology (KO) [BR:asi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:asi03032]
    ASU2_03580
   03400 DNA repair and recombination proteins [BR:asi03400]
    ASU2_03580
Enzymes [BR:asi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     ASU2_03580
DNA replication proteins [BR:asi03032]
 Prokaryotic type
  DNA Topoisomerases
   ASU2_03580
DNA repair and recombination proteins [BR:asi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      ASU2_03580
SSDB
Motif
Pfam: Topoisom_bac Topo_Zn_Ribbon TOP1_ZnF Toprim zf-C4_Topoisom Toprim_4 DUF4795 LysW-like_globular
Other DBs
NCBI-ProteinID: AFU18856
UniProt: K0G3L7
LinkDB
Position
758737..761346
AA seq 869 aa
MGKSLVIVESPAKAKTINKYLGSDYVVKSSVGHIRDLPKSGSESEKNEKAKPISTKGMTA
EQKAKLKAEKDRAALVKRMGIDPYHDWKANYQVLPDKEKVVSELKSLAKKADHIYLATDL
DREGEAIAWHLREVIGGDDDRFSRVVFNEITKNAIQKAFEKPDHLNLDRVNAQQTRRFLD
RVVGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREIKAFQPEEYWEILANTLTAKGK
LPLDLTGYKGKKFSAKNQKQADEAVKALRGSEFVVSEIDKKPTSSKASPPFITSTLQQTA
STRLGFGVKKTMMLAQRLYEAGYITYMRTDSTNLSQDALAMARGYIEEQFGSEYLPAKPN
FYSSKEGAQEAHEAIRPSDVNVKMSDLKGMEKDAERLYELIWRRFLACQMTPARYDSTSL
TVTAGDYELKAKGRVLRFDGWTKALPVQGKTAEDQVLPEVALNEKLMLEDVLPSQHFTKP
PARFSEAALVKELEKRGIGRPSTYAAIISTIQERGYVRIENRRFYAEKMGEIVTDRLDES
FSDLMNYDFTANMEETLDQIAEGNKNWKEALNNFFKDFSEQLTKAELDELEGGMKPNSLV
PTEIDCPTCARKMAIRTASTGVFLGCTGYALPPKERCKTTMNLIPEAELLNVLDEESEAK
ALLARKRCPKCDSAMDSYVIDPQRKLHICGNNPNCDGYVLEQGTFKIKGYDGPIVECDKC
GADMHLKLGRFGKYMGCTACDNTRKILKNGEVAPPREEPTHFPELKCEKSDAYFVLRDGA
SGVFMSAHNFPKSRETRAPKVAELAQYRDRLPEKLQYLVDAPQQDPEGNEAIIRFSRKEK
RQYVTSEKDGKATKWIVDYVDGKWLERKK
NT seq 2610 nt   +upstreamnt  +downstreamnt
atgggaaaatcattggttattgtggagtcaccggcgaaagctaagacaatcaataaatat
ttaggtagcgattatgtggttaaatcgagtgtcggtcatattcgtgatttacctaaaagc
ggtagtgaaagtgaaaaaaatgagaaagccaaaccgatttccaccaaaggcatgactgct
gaacaaaaagcaaaattaaaagcagaaaaagatcgtgccgcattagtcaaacgtatgggc
atcgatccttaccatgattggaaagcgaattaccaagtgcttccagataaagaaaaagtt
gtttccgaattaaaatccttagctaaaaaagcagatcatatttatctcgcaaccgacttg
gatagagaaggggaagcaattgcttggcatttacgagaagttatcggtggtgatgacgat
cgttttagccgagtggtgttcaatgaaattaccaaaaatgctattcaaaaagcatttgaa
aagccggatcatttaaatttagaccgtgtaaatgcccaacaaacacgccgctttttagac
cgtgtggtcggctttatggtatcgcctttgctttggaaaaaagtcgcacgaggcttatct
gcagggcgtgtacagtcagttgcggttaaacttttagttgagcgtgagcgagaaattaaa
gcgttccaaccggaagaatattgggaaattttagccaatacattaacggctaaaggaaaa
ttaccacttgatttaactggctataaaggtaaaaaattctcggcgaaaaatcaaaaacaa
gcggatgaagcggtaaaagcgttacgaggtagcgaatttgttgtttcagagattgataaa
aaaccaacttcatcaaaagcgagcccaccatttattacttcaacattgcaacaaacggca
agcacccgtttgggctttggcgtgaagaaaaccatgatgttagcgcaacgtttatatgaa
gcgggttatattacctatatgcgtaccgactcaaccaatttaagtcaagacgcattagcg
atggcgcgtggttatattgaagaacaattcggcagtgagtatttaccggctaaaccgaat
ttctattcaagtaaagaaggtgcacaagaagcgcacgaagcgattcgtccgtcagacgtg
aatgtaaaaatgtctgatttaaaaggtatggaaaaagatgccgagcgtctttatgagctt
atttggcggcgtttcttagcttgccagatgacaccggctcgttatgattcaaccagcctt
actgttacggcaggtgactatgaattaaaagcgaaaggacgtgtattgcgttttgacggt
tggacgaaagcattaccagtacaaggcaaaaccgctgaagatcaagtgttaccggaggtc
gcactcaatgaaaaattaatgttagaagatgtgctacctagccagcactttactaaaccg
ccggcacgtttctctgaagccgctttggttaaagaattggaaaaacgtggtatcggtcgc
ccgtctacttacgcagcaattatttcaaccattcaagagcgtggctatgtgcgtattgaa
aatcgccgtttctatgcggaaaaaatgggtgaaattgttaccgaccgtttagacgaatcc
tttagcgatctaatgaattacgactttaccgccaatatggaagaaacactcgaccaaatt
gcggaaggtaataaaaactggaaagaagcgcttaataatttcttcaaagatttctctgag
cagctgactaaagccgaattagatgagctggaaggtgggatgaagccgaatagtcttgtg
ccaacggaaattgattgtccgacttgtgcaagaaaaatggcaattcgtaccgcttctacc
ggtgtattcttaggctgtaccggttatgcgttaccgccgaaagagcgttgcaaaaccaca
atgaatctgattccggaagcggaattactcaatgtgttagatgaagaatcggaagcaaaa
gctttattagcacgtaagcgttgtccgaaatgtgattcggcaatggatagctatgtaatc
gatccgcaacgtaaattacatatttgtggtaataatccgaattgtgacggctatgtgtta
gaacaaggtacattcaaaattaaaggctatgatggcccgattgttgagtgtgataaatgc
ggtgcggatatgcatctcaaacttggtcgtttcggtaaatatatgggttgtaccgcttgc
gataacactcgtaagattctgaaaaatggtgaagtggctccgcctcgtgaagagccgacc
catttcccggaactcaaatgtgagaaatcggatgcgtatttcgtattacgtgacggcgca
agcggtgtgtttatgtcggcacacaatttcccgaaatcacgagaaacacgggcgccgaaa
gttgccgaattagcacaataccgtgatcgtttaccggaaaaattacaatatcttgtcgat
gcacctcagcaagatccggaagggaatgaagcgattatccgctttagccgtaaagaaaaa
cgtcaatatgtgacctctgaaaaagacggtaaagcgactaaatggatcgtagattacgtg
gacggcaaatggctagaacgtaaaaaataa

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