Candidatus Arthromitus sp. SFB-mouse-Yit: MOUSESFB_1216
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Entry
MOUSESFB_1216 CDS
T01857
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
asm
Candidatus Arthromitus sp. SFB-mouse-Yit
Pathway
asm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
asm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MOUSESFB_1216 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asm03400
]
MOUSESFB_1216 (nth)
Enzymes [BR:
asm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MOUSESFB_1216 (nth)
DNA repair and recombination proteins [BR:
asm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MOUSESFB_1216 (nth)
Prokaryotic type
MOUSESFB_1216 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
Urocanase_N
Motif
Other DBs
NCBI-ProteinID:
BAK80358
LinkDB
All DBs
Position
complement(1381218..1381847)
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AA seq
209 aa
AA seq
DB search
MKKKFKIIVDKLIESYPDARCELEYKSPFQLLIATVLSAQTTDKKVNEVTKNLFIEYPRL
EDFLKLDEKELQDKIKSIGLYRMKSKNIINLCRILEERFDSEVPRTRDELITLPGVGRKT
ANVVISNCFGVQAFAVDVHVFRVSNRIGIANSPTPEKTELDLMKNIDENLWTICHHTIIF
HGRRCCTSRKPNCGECKISEYCKYYKQNN
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaagtttaagattatagtagataaattgattgagagttatcctgatgctagg
tgtgaacttgaatataagagtccatttcaattacttatagctacggttttatccgctcaa
actacagataaaaaagtaaatgaggtgacaaagaatttatttatagaatatccaagattg
gaagactttttaaaattagacgagaaggagcttcaagacaagataaaatctattggatta
tataggatgaagagtaaaaatattataaatttatgtaggattttagaggaaagattcgat
agcgaagttcccagaactagagatgaattgataactttacctggtgtagggcgtaaaact
gcaaatgttgttatatctaactgttttggtgtacaagcttttgcagttgatgtacatgta
tttagagtgtctaatagaataggtatagctaattcaccgactccagagaaaaccgagtta
gatcttatgaaaaatattgatgaaaatttatggacaatttgccatcatactattattttt
catggaaggagatgctgtacatctaggaagccaaattgtggagaatgtaaaataagtgaa
tattgtaaatattataaacaaaataattag
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