KEGG   Alteromonas stellipolaris LMG 21861: AVL57_14020
Entry
AVL57_14020       CDS       T04545                                 
Name
(GenBank) hypothetical protein
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
asq  Alteromonas stellipolaris LMG 21861
Pathway
asq03030  DNA replication
asq03430  Mismatch repair
asq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:asq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AVL57_14020
   03430 Mismatch repair
    AVL57_14020
   03440 Homologous recombination
    AVL57_14020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:asq03032]
    AVL57_14020
   03400 DNA repair and recombination proteins [BR:asq03400]
    AVL57_14020
Enzymes [BR:asq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AVL57_14020
DNA replication proteins [BR:asq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AVL57_14020
DNA repair and recombination proteins [BR:asq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AVL57_14020
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 DNA_pol3_tau_5 AAA AAA_14 AAA_5 RuvB_N AAA_22 AAA_2 AAA_18 Rad17 ResIII AAA_16 DNA_pol3_delta AAA_19 AAA_assoc_2 AAA_7 nSTAND3 AAA_24
Other DBs
NCBI-ProteinID: AMJ74984
LinkDB
Position
complement(3001840..3004710)
AA seq 956 aa
MSYQVLARKWRPGKFSELVGQEHVVSAISNALDNDRLHHAYLFTGTRGVGKTTIARIFSK
SLNCEEGQGSNPCGQCNTCKEIEQGNYVDLLEIDAASRTKVEDTRELLDNVQYKPTRGRY
KVYLIDEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPITILSRCLQFNLKALSR
EQIVGQLNHILEQETLPFEPQALALLARAAQGSMRDALSLTDQAIAQGGNAVNASVVTDM
LGLMDKNQLVKLLHAVVSKTPADVMQLVQDMSEQAPDYDHVLAELGSTLHQIALTQWVPE
ACKLETTSAKAIYQLAKSISAEQVQLLYQIALQGRKDLPFSSDGRSALEMTLMRMMTFAP
STPLADAPSEIANGTVDSALPIASAEKKTLISEPETQSTTSTASALGAKSADSFENTQSQ
FHKESTNAGSSTAGEEVPSNEQDAQSANVLDAVTATDETDHAQTDDISSSSDVAGLTASQ
IIPSEQETSVYEKEVHDEVASQSVASFEQTEQSQQLAHPKDGQPSGASQPAANNQSSVDD
LPSSDELPSKEDSQQPQSLLSEHTPSDSAPFNDMPPADAYMDDMPPPYDDDGESSFMPPD
FADAQLSNAPLLDEGPDFQSTPKPTPEAQLTSTADMLALRQRLKQKRDESAEQAAKKPEA
ANETTSFVDRMSKASSQGSLAASSEGQGDEQFKGAADESNARQETTTAKATAPSSSDNLN
TNSSAGLDAGSNTTSNASSQSETDMPPWDTGVHHNNEPFVTSEHDTRFEPPMTDVAQYGG
NSETARNEPQPLEPEPSDTRNEFSAEPVNQFTSQYQGKLAAYLDDGSKLVHASQIDKWSN
DVEQMPIAGLLKQLVLHASFLRNDQGITLEIDNSQAHLLKDSAKQQLLDVLHHSFGEGEN
INITLGSPNLTPYALQQDIIAMRQAHAQSVVHTDETIQALLSAFDASIVTDSVKAR
NT seq 2871 nt   +upstreamnt  +downstreamnt
atgagttatcaggtattagcacgtaaatggcgcccgggtaagtttagtgaactcgtaggg
caggaacatgttgtttcagctatttcgaatgcgttagataacgaccgcttgcaccacgcg
tacctatttacaggtacgcgaggggtaggtaaaaccaccattgctcgtatattttccaaa
agtttaaactgcgaagaggggcaggggtctaacccttgtggtcaatgtaatacctgtaaa
gaaattgagcagggtaattatgttgatttgcttgaaattgatgcggcatcacgcacaaag
gtagaagatacccgagagttgcttgataacgttcaatacaagcctacccgcggccggtat
aaggtgtaccttattgatgaagtacacatgctttctaagcacagctttaacgcgttgcta
aaaacgctagaagagccaccgcctcacgttaagtttttactggctactaccgatccacaa
aagctccctattactattttatcccgatgcttacagtttaatttaaaagcattgtcgcga
gagcaaatagtagggcagcttaatcatattctagagcaagaaaccttaccctttgagccg
caagcgctagcgttgttagcccgcgctgcacaggggagcatgcgtgatgccttaagctta
accgaccaagccattgcacaaggtggtaatgcggttaacgcttcagtggtcaccgacatg
cttgggttgatggataaaaaccagcttgtgaagttattgcatgcggtggtaagtaaaacg
ccagccgatgtcatgcaattggttcaggatatgtcggaacaagcacctgattacgatcat
gtgcttgcagagctaggcagcacactacatcaaatagcgctaacccaatgggtgcctgaa
gcctgtaaattggaaacgacttcagccaaagctatttaccaacttgctaaatcaatttct
gctgaacaagtgcaattgttatatcaaattgcgctgcaaggaagaaaggacttacctttc
tcatcagatggcaggagcgcattagaaatgacgctaatgcgtatgatgacatttgcacct
agcacccctttagctgatgcgccctctgaaatagccaatggtacggttgacagtgcgttg
cctattgcatcggcggaaaaaaaaacactaatttctgagccagaaacgcaaagtacgact
tctaccgctagcgctcttggtgctaaaagtgcggatagctttgaaaacacccaaagccaa
tttcataaagaaagtacaaacgctgggtcatcgacagccggtgaagaggttcccagcaat
gaacaagatgctcaaagcgctaatgttttagatgcagtaactgcaactgatgaaaccgac
cacgcgcaaactgatgacatttcctcttcttctgacgtagcaggtttaaccgcttcgcag
attattccctctgaacaagaaacctcggtttatgaaaaagaggtgcatgacgaagtcgct
tcccaatcggtagcatcttttgaacagacagagcagtcgcagcagttagcgcatccgaaa
gatggccagccttcaggtgcctctcagcctgcagcaaataatcaatcttcagtagatgat
ctgccttcaagtgatgagctaccttcaaaagaagatagccagcaaccccaaagtttgtta
tcagagcatacaccttcagattcggcaccgtttaatgacatgccgcctgctgatgcttac
atggacgatatgccaccgccttacgatgatgatggtgagtcgtcatttatgccgcctgat
tttgccgatgctcagctttcaaatgcaccgctattagatgaaggtcctgattttcaatct
acgcctaagcccacgccagaggcacagctgacatccaccgctgatatgctcgcgctacga
cagcgattaaagcaaaagcgtgatgaaagcgcagaacaagctgcgaaaaagcctgaagcg
gcgaacgaaactactagttttgtagatagaatgagtaaggcttccagccaaggctcactt
gccgcttctagtgaaggacaaggtgatgaacaatttaaaggcgcggctgatgagagcaac
gctcgccaagaaacaactactgcaaaggcaactgcgccatctagctctgataatttaaat
acaaattcaagtgcaggtttagatgctggctctaatacgacttctaacgctagctcgcaa
agcgaaaccgatatgcccccgtgggataccggtgtgcaccataataacgagccgtttgtt
accagtgagcacgatacccgttttgaaccaccaatgactgacgtggcgcagtatggcggc
aatagcgaaacagctcgtaatgaaccacagcctttagaaccagagccaagtgatacccgt
aatgaatttagcgctgaaccagtaaatcagttcacaagtcagtatcaaggtaagctcgcc
gcttatctggatgatggtagtaagcttgttcacgcgagccaaattgataagtggagcaat
gatgtagagcaaatgcctattgcaggcttgcttaaacaattggtgcttcatgcctctttt
ttgcgaaatgatcagggtataacgcttgaaattgataacagtcaggcgcatctattaaaa
gacagtgcaaaacaacagttgcttgatgtattgcatcatagttttggcgaaggggagaac
attaacatcacccttggttcgccaaatctaacgccttatgcgttgcaacaagacattatt
gctatgcgccaagcgcatgcacaatcggtggtacataccgatgaaacaatacaagcgttg
ttatcagcgttcgacgcatcaatagtgaccgactcggttaaagcgcggtag

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