Alteromonas stellipolaris LMG 21861: AVL57_14020
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Entry
AVL57_14020 CDS
T04545
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
asq
Alteromonas stellipolaris LMG 21861
Pathway
asq03030
DNA replication
asq03430
Mismatch repair
asq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AVL57_14020
03430 Mismatch repair
AVL57_14020
03440 Homologous recombination
AVL57_14020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asq03032
]
AVL57_14020
03400 DNA repair and recombination proteins [BR:
asq03400
]
AVL57_14020
Enzymes [BR:
asq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AVL57_14020
DNA replication proteins [BR:
asq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AVL57_14020
DNA repair and recombination proteins [BR:
asq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AVL57_14020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
AAA_14
AAA_5
RuvB_N
AAA_22
AAA_2
AAA_18
Rad17
ResIII
AAA_16
DNA_pol3_delta
AAA_19
AAA_assoc_2
AAA_7
nSTAND3
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AMJ74984
LinkDB
All DBs
Position
complement(3001840..3004710)
Genome browser
AA seq
956 aa
AA seq
DB search
MSYQVLARKWRPGKFSELVGQEHVVSAISNALDNDRLHHAYLFTGTRGVGKTTIARIFSK
SLNCEEGQGSNPCGQCNTCKEIEQGNYVDLLEIDAASRTKVEDTRELLDNVQYKPTRGRY
KVYLIDEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPITILSRCLQFNLKALSR
EQIVGQLNHILEQETLPFEPQALALLARAAQGSMRDALSLTDQAIAQGGNAVNASVVTDM
LGLMDKNQLVKLLHAVVSKTPADVMQLVQDMSEQAPDYDHVLAELGSTLHQIALTQWVPE
ACKLETTSAKAIYQLAKSISAEQVQLLYQIALQGRKDLPFSSDGRSALEMTLMRMMTFAP
STPLADAPSEIANGTVDSALPIASAEKKTLISEPETQSTTSTASALGAKSADSFENTQSQ
FHKESTNAGSSTAGEEVPSNEQDAQSANVLDAVTATDETDHAQTDDISSSSDVAGLTASQ
IIPSEQETSVYEKEVHDEVASQSVASFEQTEQSQQLAHPKDGQPSGASQPAANNQSSVDD
LPSSDELPSKEDSQQPQSLLSEHTPSDSAPFNDMPPADAYMDDMPPPYDDDGESSFMPPD
FADAQLSNAPLLDEGPDFQSTPKPTPEAQLTSTADMLALRQRLKQKRDESAEQAAKKPEA
ANETTSFVDRMSKASSQGSLAASSEGQGDEQFKGAADESNARQETTTAKATAPSSSDNLN
TNSSAGLDAGSNTTSNASSQSETDMPPWDTGVHHNNEPFVTSEHDTRFEPPMTDVAQYGG
NSETARNEPQPLEPEPSDTRNEFSAEPVNQFTSQYQGKLAAYLDDGSKLVHASQIDKWSN
DVEQMPIAGLLKQLVLHASFLRNDQGITLEIDNSQAHLLKDSAKQQLLDVLHHSFGEGEN
INITLGSPNLTPYALQQDIIAMRQAHAQSVVHTDETIQALLSAFDASIVTDSVKAR
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggtattagcacgtaaatggcgcccgggtaagtttagtgaactcgtaggg
caggaacatgttgtttcagctatttcgaatgcgttagataacgaccgcttgcaccacgcg
tacctatttacaggtacgcgaggggtaggtaaaaccaccattgctcgtatattttccaaa
agtttaaactgcgaagaggggcaggggtctaacccttgtggtcaatgtaatacctgtaaa
gaaattgagcagggtaattatgttgatttgcttgaaattgatgcggcatcacgcacaaag
gtagaagatacccgagagttgcttgataacgttcaatacaagcctacccgcggccggtat
aaggtgtaccttattgatgaagtacacatgctttctaagcacagctttaacgcgttgcta
aaaacgctagaagagccaccgcctcacgttaagtttttactggctactaccgatccacaa
aagctccctattactattttatcccgatgcttacagtttaatttaaaagcattgtcgcga
gagcaaatagtagggcagcttaatcatattctagagcaagaaaccttaccctttgagccg
caagcgctagcgttgttagcccgcgctgcacaggggagcatgcgtgatgccttaagctta
accgaccaagccattgcacaaggtggtaatgcggttaacgcttcagtggtcaccgacatg
cttgggttgatggataaaaaccagcttgtgaagttattgcatgcggtggtaagtaaaacg
ccagccgatgtcatgcaattggttcaggatatgtcggaacaagcacctgattacgatcat
gtgcttgcagagctaggcagcacactacatcaaatagcgctaacccaatgggtgcctgaa
gcctgtaaattggaaacgacttcagccaaagctatttaccaacttgctaaatcaatttct
gctgaacaagtgcaattgttatatcaaattgcgctgcaaggaagaaaggacttacctttc
tcatcagatggcaggagcgcattagaaatgacgctaatgcgtatgatgacatttgcacct
agcacccctttagctgatgcgccctctgaaatagccaatggtacggttgacagtgcgttg
cctattgcatcggcggaaaaaaaaacactaatttctgagccagaaacgcaaagtacgact
tctaccgctagcgctcttggtgctaaaagtgcggatagctttgaaaacacccaaagccaa
tttcataaagaaagtacaaacgctgggtcatcgacagccggtgaagaggttcccagcaat
gaacaagatgctcaaagcgctaatgttttagatgcagtaactgcaactgatgaaaccgac
cacgcgcaaactgatgacatttcctcttcttctgacgtagcaggtttaaccgcttcgcag
attattccctctgaacaagaaacctcggtttatgaaaaagaggtgcatgacgaagtcgct
tcccaatcggtagcatcttttgaacagacagagcagtcgcagcagttagcgcatccgaaa
gatggccagccttcaggtgcctctcagcctgcagcaaataatcaatcttcagtagatgat
ctgccttcaagtgatgagctaccttcaaaagaagatagccagcaaccccaaagtttgtta
tcagagcatacaccttcagattcggcaccgtttaatgacatgccgcctgctgatgcttac
atggacgatatgccaccgccttacgatgatgatggtgagtcgtcatttatgccgcctgat
tttgccgatgctcagctttcaaatgcaccgctattagatgaaggtcctgattttcaatct
acgcctaagcccacgccagaggcacagctgacatccaccgctgatatgctcgcgctacga
cagcgattaaagcaaaagcgtgatgaaagcgcagaacaagctgcgaaaaagcctgaagcg
gcgaacgaaactactagttttgtagatagaatgagtaaggcttccagccaaggctcactt
gccgcttctagtgaaggacaaggtgatgaacaatttaaaggcgcggctgatgagagcaac
gctcgccaagaaacaactactgcaaaggcaactgcgccatctagctctgataatttaaat
acaaattcaagtgcaggtttagatgctggctctaatacgacttctaacgctagctcgcaa
agcgaaaccgatatgcccccgtgggataccggtgtgcaccataataacgagccgtttgtt
accagtgagcacgatacccgttttgaaccaccaatgactgacgtggcgcagtatggcggc
aatagcgaaacagctcgtaatgaaccacagcctttagaaccagagccaagtgatacccgt
aatgaatttagcgctgaaccagtaaatcagttcacaagtcagtatcaaggtaagctcgcc
gcttatctggatgatggtagtaagcttgttcacgcgagccaaattgataagtggagcaat
gatgtagagcaaatgcctattgcaggcttgcttaaacaattggtgcttcatgcctctttt
ttgcgaaatgatcagggtataacgcttgaaattgataacagtcaggcgcatctattaaaa
gacagtgcaaaacaacagttgcttgatgtattgcatcatagttttggcgaaggggagaac
attaacatcacccttggttcgccaaatctaacgccttatgcgttgcaacaagacattatt
gctatgcgccaagcgcatgcacaatcggtggtacataccgatgaaacaatacaagcgttg
ttatcagcgttcgacgcatcaatagtgaccgactcggttaaagcgcggtag
DBGET
integrated database retrieval system