Acetobacter oryzifermentans: WG31_05950
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Entry
WG31_05950 CDS
T04478
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
asv
Acetobacter oryzifermentans
Pathway
asv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
asv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WG31_05950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asv03400
]
WG31_05950
DNA repair and recombination proteins [BR:
asv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WG31_05950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_5
UVR
HHH
GIY-YIG
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ANA13615
LinkDB
All DBs
Position
1234581..1236494
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AA seq
637 aa
AA seq
DB search
MMTADSSPSDTLPVVQEQAAPAVKGVEAIRHALKTMPLSPGVYRMLGAKGEVLYVGKALA
LKKRVTSYTHINRLPERLRRMVSETVAMEIVTTHTEAEALLLEANYIKRMKPRFNILLRD
DKSYPWLMLTDAHAFPQIAKHRGKAIKGASLWGPFASAWAVNQTLNLIQRVFLLRSCTDA
VFNARTRPCLLYQIKRCSGPCVDRIDQEAYGKLVEQAREFLSGKDTALRETLGQEMNAAA
EALDFERAAVLRDRIRALAQMQESSVINPASLQDADVLALWQEAGHACIQLFFIRGGRNN
GSRSFFPAHTQDASPADVLSAFIAQFYDDKPCPAQILVNYELPESLLLTEALSLRRGRKV
EILAPQRGEKKQVLDHAVSNARDALSRKLAETAGQAKLLQGVADVLGLDAPPERIEVYDN
SHIQGSHAYGVMIVGGPEGFNRKAYRKFKIKGPVTPGDDFGMMREVLERRFGRALKEAED
GDTSNWPDVLLIDGGAGQYSAVRSVLDDLGVTGVKLVGIAKGPDRDAGKEWFYTEDKEPF
QLDLRDPVLYYLQRLRDEAHRFAITTHRSGRSKTLVKSELDDVPGIGPARKKLLLNTFGS
ARAIKQAGLAELEAAHGISRETARAIYGHFHPDWTPG
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgatgacagctgattcttccccttcagataccctgcctgtggtgcaggaacaggcagcc
cctgctgtaaagggggtagaggccattcggcatgcacttaaaaccatgccgctttcaccc
ggcgtgtatcgtatgctcggcgctaagggggaagtgttgtacgttggcaaggcgttggcg
cttaaaaagcgggtaacgtcttacacccacattaaccgcttgcccgaacggctacggcgc
atggtttccgaaacggtagcaatggaaattgttaccacccatacggaagccgaagcactg
ttgctggaggccaactacatcaagcgcatgaagccgcgcttcaacattctgctgcgggat
gacaaaagctatccgtggctgatgctgacagatgcgcatgcgtttccgcaaattgccaaa
caccgtggcaaggccattaaaggagccagcctatgggggccgtttgcttcggcttgggcg
gttaatcagaccctcaatctgatccagcgcgtttttctgctacgctcctgcacggatgcg
gtttttaacgcacgcacccggccgtgcctgctttatcaaatcaaacgttgctctggcccg
tgtgtagatcgaatagatcaggaagcttacggcaaattggtggagcaggcgcgagagttc
ctttctggcaaggatacggcgctgcgtgaaaccttgggacaggaaatgaatgcggcagca
gaagcgctggattttgagcgtgctgctgtattgcgtgatcgtattcgtgcgttggcgcaa
atgcaggaatccagcgtaatcaaccccgcatctcttcaggatgcagatgtgctggccctg
tggcaggaggccggacacgcctgtattcagctctttttcattcgcggtggacgtaataat
ggcagccgctcattctttcccgcccatacgcaggatgcctcacccgcagatgtgctttct
gcctttatcgcgcagttttacgatgacaaaccctgtccagcacagattttggtcaattat
gaactcccggaatctttgctgctgacagaggcactctctcttcggcgggggcggaaggtg
gaaattcttgcgccgcaaaggggcgagaaaaagcaggtgcttgaccatgccgtgagcaac
gcgcgggatgcactaagccgcaagctggcggaaaccgcagggcaggccaagttgctacaa
ggcgtggcagatgttctggggctggatgcgccgccagaacgcatagaagtgtacgataac
agccatattcagggctcgcacgcctatggtgttatgattgtgggcgggccggagggcttt
aaccgcaaggcgtatcgcaagttcaaaatcaaaggccctgtcacgccgggggatgatttt
ggcatgatgcgcgaagtgctggaacgccgctttggtcgcgctttgaaagaggcagaagat
ggcgatacctctaattggccagatgttctgctgattgatggtggggcagggcaatattct
gccgtgcgcagtgtgctggatgatctgggcgtaacgggtgtaaaacttgtaggtattgcc
aaagggccggaccgcgatgctgggaaggagtggttctatacggaggataaggaacccttc
cagctcgatctgagagaccccgtactgtactatttgcaacggttgcgcgatgaggcccac
cgttttgccattaccacccataggtctggtagatccaaaacactggtgaagtccgaactg
gatgatgtgcccggtattgggcctgcacgtaaaaagctgttgttaaacacatttggttca
gcgcgtgctatcaagcaggctggtttggcagaactggaagccgctcatggtatcagccgg
gaaacagcgcgtgccatttacggccattttcacccggattggacaccgggataa
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