Acetobacter oryzifermentans: WG31_12075
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Entry
WG31_12075 CDS
T04478
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
asv
Acetobacter oryzifermentans
Brite
KEGG Orthology (KO) [BR:
asv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asv03016
]
WG31_12075
Enzymes [BR:
asv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
WG31_12075
Transfer RNA biogenesis [BR:
asv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
WG31_12075
Prokaryotic type
WG31_12075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ANA15083
LinkDB
All DBs
Position
complement(2551558..2552475)
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AA seq
305 aa
AA seq
DB search
MRRRRGRPLNGWLIVDKPSGMTSTQVVGRAKRLFDAQKVGHGGTLDPLATGLLPLAFGTA
TKTVPYVMDGTKVYRFTLKMGEARDSDDADGNVIGTSDVRPSDEELRAALPALTGDIMQV
PPVFSALKVGGERSYDMAREGRPPELPPRPARVDRFELIERPDRDTAVFEVESGKGVYMR
ALARDVALACGTVGHITVLRRLRVGPFTEADAIVLDKITPNDDNAHASPELLRPVSTALA
DIPALALTQDEAVLLRHGQALGLVDLMGRIPQTAEEGGVVRVMDGEHVLGIGRLEDGWLK
PVRIL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgcagacgtgggcggccacttaatggctggcttatagtagacaagccttccggc
atgacatcaacacaggtagtggggcgcgccaaacggctgtttgatgcgcaaaaagttggg
catggcggcacactggacccactggcgacgggtttgctgccactggcttttggtaccgct
acaaaaaccgtgccttacgtgatggatggaaccaaggtgtaccgcttcactcttaaaatg
ggtgaagcgcgagatagcgatgatgccgatggcaatgttattggtacatctgatgtgcgg
ccttctgatgaagaactgcgagcagccttacccgcgcttacgggtgatatcatgcaggta
cctcccgttttttctgctttgaaagtggggggagagcgttcttacgatatggcgcgagaa
ggtcgtccgccggaattgccgccgcggcccgcacgcgtagatcggtttgaactgattgag
cggccagatcgggatacagcagtgtttgaagtcgaatccggcaagggcgtttatatgcgt
gcgctggcgcgtgatgtggctttggcatgcggaacagtgggacatattaccgtgctgcgc
cgcctgcgtgtggggccttttacagaagccgatgcgattgtgctggacaaaatcacccca
aacgacgacaacgcccatgcttcaccggaacttctgcgtccggtctcgaccgcgctggcc
gacatcccggcgctggccttgacacaggatgaagcggttctgctacggcacgggcaagct
ctcggccttgttgatctgatggggcgtatcccacagaccgccgaggaggggggcgttgtg
cgtgttatggacggtgagcacgtgctgggtattggccgcctggaagacgggtggttgaag
ccggtacggattctctaa
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