Alkalitalea saponilacus: CDL62_03235
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Entry
CDL62_03235 CDS
T04906
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
asx
Alkalitalea saponilacus
Pathway
asx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
asx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CDL62_03235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asx03000
]
CDL62_03235
Transcription factors [BR:
asx03000
]
Prokaryotic type
Helix-turn-helix
Other families
CDL62_03235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
AAA_5
HTH_8
MCM
AAA_2
AAA
GAF_3
Mg_chelatase
AAA_3
AAA_16
AAA_7
nSTAND3
HTH_50
Motif
Other DBs
NCBI-ProteinID:
ASB48222
UniProt:
A0A1T5GQG6
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All DBs
Position
863578..865146
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AA seq
522 aa
AA seq
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MSIKPETFLDNCYGSRELNLLVEFSDLLGNKEIDLNHVISQLGEHLLAERIILTIYNRES
GQIFIEGTYGVSEEGKKDINYVPGEGIIGTVIETGKPVLIRKTGESESYLNRMRTPLKVN
GEDVSFICVPIRYKNETIGTLSFHKIYGRSHLLFDEDVRLLKIVGSMIGRAVKRRQEYAE
EMAHLLNENQTLKGVISNQIQSDNIIGNSGKMSDVFALIESVASTDATVLIRGESGVGKE
LIADAIHQNSHRKEKPFIKVNCAALPENLIESELFGHEKGAFTGAIATRAGRFEAADGGT
IFLDEFGEIPLSTQVKLLRVIQQKEIERVGASKTIKTDVRIICATNRNLEELIQKGEFRE
DLYYRINVFPIYVPPLRERINDIPVLANHFIDKFNKRHGKNIKRITSMAIDLLMVYHWPG
NIRELENCMERAYILSNDGVIRAHNMPPTLQTAVSSKTSETGTLEMILEKHEKQLIIDSM
VATKGNMVKAAKNLGITERMMGIRIKKYNIDPKRFKSRKAEG
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcaaacctgaaacattccttgataactgttatggttcaagagaactcaaccta
ttggttgagttcagcgaccttcttggaaataaagagatagacttaaatcatgttatctct
caacttggggagcatcttttagctgaacggataatcctgaccatctacaacagggaaagt
ggacagatttttattgaaggcacatatggagtttcagaggaaggaaaaaaagacatcaac
tatgtgcctggtgaaggaattataggtactgtaattgagaccggcaaacctgtcctaatt
agaaaaacgggagaatctgaaagctacctgaatcgtatgcgaacaccattaaaggtgaat
ggagaagatgtttcctttatctgtgtgcccattcgatataaaaacgaaaccattggaacc
ttaagttttcataaaatatatggtcgaagccatcttctttttgatgaagatgtacgcctg
ctaaaaattgtaggttctatgattggccgtgcagtaaaacgccgacaggaatatgccgaa
gagatggcacacctgctcaacgaaaatcaaacattaaaaggagttattagcaaccagata
caatcagacaacatcattggaaacagtggtaaaatgagcgatgtttttgcactgattgaa
agcgtagcttccaccgatgcaaccgtcctgataaggggagaaagcggagttgggaaagaa
ctaattgcggatgccatacaccaaaacagccaccgtaaggagaagccatttattaaagta
aattgtgctgcgttacccgaaaatttgattgaaagcgaactttttgggcacgaaaaaggc
gcatttaccggagcaatcgctacccgagccgggcgatttgaagcagctgatggcggcacc
atttttcttgatgaatttggagaaatccccctctccactcaggtgaaattactgagagtt
attcagcaaaaagagattgaacgcgtaggagcttctaaaaccattaaaaccgatgtgaga
attatttgtgccaccaaccgaaacctggaagagttgattcaaaaaggggagttcagagaa
gatttgtattacagaattaacgtattcccaatttatgttcctcccctcagagagagaatc
aacgatattcctgtgttggcaaaccactttattgacaaatttaataagcggcatggtaaa
aacataaaaagaatcacgtccatggccattgacctgttgatggtatatcattggcctgga
aatatccgggaactcgaaaactgtatggaacgcgcatacatattgagcaacgatggcgta
atacgggctcacaacatgcctccaaccctgcaaaccgccgtttccagcaaaaccagtgaa
acaggcacactggagatgattcttgaaaaacatgaaaaacaactcattattgattcaatg
gttgccacaaaggggaacatggtgaaagccgctaaaaaccttggcattacagagcgcatg
atgggaataagaataaaaaaatacaacatcgaccccaagagatttaaatccagaaaagca
gaaggatag
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