Agrobacterium tumefaciens S33: AWN88_00440
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Entry
AWN88_00440 CDS
T04213
Name
(GenBank) hypothetical protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ata
Agrobacterium tumefaciens S33
Pathway
ata02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ata00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AWN88_00440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ata02000
]
AWN88_00440
Transporters [BR:
ata02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
AWN88_00440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AMD56791
LinkDB
All DBs
Position
circular:96257..98209
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AA seq
650 aa
AA seq
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MKYKVHSLRYSAAAFAALMLAAGPAWSQDYKEAPALAEMVKEGKLPPVAERLPKVPMVVQ
PFERPGQYGGTWRLTMASASDIGTLARTIGYENLTRWETWQPGQKQDDIFPKVEMNVAEA
VDVNPEATEYTFKLRQGMKWSDGQPFTADDVMFWYEDVYSNSEVMPTRPAWSVRDGKPVV
VEKIDDYTVKFTFASSNAILLQSLSDPPRLPEPNVPTAYPRHYLKQFHIKYNPDADQQAR
SSGAQNWVSQFNSKADAWRNPEVPRLNPWIVSVGIGQGSGNQVVAKRNPYYFKTDPQGNQ
LPYIDSATIDIISDPEVTLLKSANGDFDMVDSYIGFVTTPENKGTFFDNQERGNYDFYEV
IPNRANLMILSLNMTSKDEAKREMFGNKQFRAALSTAINRNEIIELVWLGQGLPYQTVER
PESPLFDEEMATQFTNYDSAEANRMLDEAGYEKRNGEGIRLDSKGRPITFTVDISVLRKP
WVDAAELIRKYWRDVGVNLLINTSDNTALNQRVYNNDHDAAVWSASGGADTIFDPKYYLP
YSRDSFFATAWGQWYSNGRVQEEPPEDVKKQMETYSQIVATTDPAKRLDLMRQVMQVSKE
KFYTIGIMQPTTDYGIINRRLKNVPKTMMASTIYAHPGSAKPEQFFFTQE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaagtacaaggttcattcgttgaggtactcggcggcggcattcgccgcgctgatgctt
gccgccggtcctgcctggtcgcaggactacaaggaggcgcctgctcttgcggagatggtg
aaggaaggcaagctgccacccgtggccgaacgacttccgaaggtccccatggtcgtgcag
cctttcgaacgtcccggtcagtacggtggcacgtggcggctgacgatggcctccgccagc
gacatcgggacgctcgcccgtacgatcggatacgagaacctcacgcggtgggagacctgg
cagccgggtcagaaacaggacgacatcttcccgaaagtggagatgaacgtcgccgaggcg
gtcgacgtcaatccggaagcgaccgaatatacgttcaagctgcggcaggggatgaagtgg
tcggacggccagccgttcacagccgacgacgtgatgttctggtacgaggacgtctattcc
aacagcgaggtgatgcctaccagaccggcctggtccgtcagggacggcaagcctgtcgtt
gtcgagaagatcgatgattacacggtcaagttcacgttcgcttcatcgaacgcgatcctg
ctgcagtccctgtcagatccgccgcggctgcccgaacccaacgtgccgacagcctatccg
cgccactacctgaaacagttccacatcaagtacaatcccgatgcggaccagcaggccaga
tcatccggggcgcagaactgggtgtcgcagttcaattccaaggcggacgcctggagaaat
cccgaggtcccgagactgaacccctggatcgtctcggtcgggatcggtcagggcagcggc
aaccaggtggtcgccaagcgcaatccatattacttcaagacggacccgcagggtaatcag
cttccttatatcgactctgcgacgatcgacatcatctcggatccggaagtcaccctgctg
aagtcagccaacggcgacttcgacatggtggacagctatatcggcttcgtgacgacgcca
gagaacaagggcacgttcttcgacaaccaggagcgcgggaactacgacttctacgaggtc
attcccaaccgcgccaacctgatgatcctgtcgctcaacatgacgtcgaaggacgaggcc
aagcgggagatgttcggcaacaagcagttccgtgccgcactgtcgaccgcgatcaaccgc
aacgagatcatcgaactggtttggctggggcagggacttccctaccagacggtcgagcgt
ccggaatcgcccctcttcgacgaggagatggcgacccagttcaccaactacgattcggcc
gaggcaaaccggatgctggacgaggcgggctatgaaaaacgcaacggtgaaggcatccgg
cttgactccaaagggcggccgatcaccttcacggtcgatatttccgtgctgagaaaaccc
tgggtggatgccgccgaattgatccgcaagtactggcgcgacgtcggcgtcaacctgctg
atcaacaccagcgacaacacggcactcaaccagcgggtttacaacaacgaccacgatgcg
gcggtctggtcggcatcaggtggagcggacacgatctttgaccccaaatactaccttccc
tactcgcgcgactccttcttcgccaccgcctgggggcagtggtactccaacggtcgcgtg
caggaggagccgccggaagacgtcaagaagcagatggaaacctacagccagatcgtcgcc
acgacagatccggccaaacggctcgatctcatgcgtcaggtcatgcaggtttcgaaggag
aagttctacacgatcggcatcatgcagccgacgaccgattacggcatcatcaaccgtcgg
ctcaagaacgtgccgaagacgatgatggccagcacgatctacgctcatccgggctccgcc
aagcctgagcagttcttcttcacgcaggaatag
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