Agrobacterium tumefaciens S33: AWN88_21385
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Entry
AWN88_21385 CDS
T04213
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ata
Agrobacterium tumefaciens S33
Brite
KEGG Orthology (KO) [BR:
ata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ata03016
]
AWN88_21385
Enzymes [BR:
ata01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AWN88_21385
Transfer RNA biogenesis [BR:
ata03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AWN88_21385
Prokaryotic type
AWN88_21385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AMD60694
LinkDB
All DBs
Position
linear:2106670..2107470
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AA seq
266 aa
AA seq
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MPRFRMTVEYDGTPYYGWQRQENGPSVQGALEAAVRSLTGESVSIRGAGRTDSGVHAVGQ
VVHVDLSRDWEPYKLRNAINAHLAMAGEAVAVLDAASVTEDFDARFSALRRHYLYRIICR
KARLALEHKRAWWVSKDLDHERMHEAAQMLVGRHDFTTFRSVHCQANSPVRTLDRLDVTR
DGDLIEIRATAQSFLHNQIRSFAGTLKLAGEGTMTPEDVRAALEARDRKACGPVAPPDGL
YFMQVDYPDVIPPRRHPEAEVMQDAD
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcttccgcatgaccgtcgaatatgacggtacgccctattatggctggcagagg
caggagaacggcccttccgttcaaggcgcgctggaggctgcggttcggtcgctgaccggc
gagagcgtttccattcgcggcgctggccgcaccgattccggcgtgcatgccgttgggcag
gttgtccatgtcgatctctcgcgagactgggagccctacaagctacgcaatgccatcaat
gcgcatctcgccatggcgggtgaagcggtggccgtgctcgatgccgcctccgtgactgag
gatttcgacgcccgtttttccgcccttcgtcggcactatctctaccgcatcatctgccgc
aaagcccggctggcgctggagcacaagcgggcgtggtgggtgtcgaaggacctcgatcat
gagcgcatgcatgaagccgcccagatgctcgttggccggcatgatttcaccaccttccgc
tccgtgcactgccaggcgaacagccccgtgcgcacgctcgaccggctggatgtgacgcgc
gatggcgatctcatcgagatacgcgcgacggcgcagagcttccttcataaccagatccgc
tctttcgccggcacgctgaaactggcaggcgagggcacgatgacgccagaggacgtgcgt
gccgcactggaggcacgcgatcgaaaggcctgtggcccggtcgcgccaccggacggtctt
tatttcatgcaggtcgattatcccgacgtcattccgccgcgccgacaccccgaagccgag
gtgatgcaggatgcggattga
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