Aethina tumida (small hive beetle): 109597006
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Entry
109597006 CDS
T06105
Name
(RefSeq) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109597006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atd03019
]
109597006
03009 Ribosome biogenesis [BR:
atd03009
]
109597006
Messenger RNA biogenesis [BR:
atd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
109597006
Ribosome biogenesis [BR:
atd03009
]
Eukaryotic type
Pre-60S particles
RNases
109597006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Rap1a
Motif
Other DBs
NCBI-GeneID:
109597006
NCBI-ProteinID:
XP_019868187
EnsemblRapid:
ENSATDG00005007530
LinkDB
All DBs
Position
3:complement(join(22954255..22954599,22954658..22954819,22954872..22954957,22955010..22955079))
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AA seq
220 aa
AA seq
DB search
MHRTITKLVNNFTKVLKASPRAMTYENHVITKVENEKPLDLEINRIVWIDMEMTGLNIEQ
DKIMEVACLVTDSDLNVIAEGPDLIIHQPKDILDQMNEWCVNQHGQTGLTEACLKSNITV
GDAEHTLLKFIKEHVTEKASPLAGNSVYMDRMFLKKYMPTLNEYLHYRLIDVSTIKEICR
RWNPDLYKSIPKKEYTHRALQDIKESVEELKFYKQNFLKF
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgcatagaactattaccaaactggtgaacaattttacgaaagtattaaaagcatcgccc
agagcaatgacgtatgaaaaccatgtaataacaaaagtagaaaacgaaaaacctttagac
ttggaaataaatcgaatagtatggatagacatggagatgacgggattaaacatagaacaa
gacaaaatcatggaagtagcatgtttggtaacagattcagacctaaatgtcatagctgaa
ggtccagatttaataatacatcaacccaaagacatcttagatcaaatgaatgaatggtgt
gttaatcaacatggacaaacaggattaactgaggcttgtctgaaatccaatatcacagta
ggtgatgccgaacataccttacttaagtttattaaggagcatgttactgaaaaggccagt
ccattagcagggaactctgtatacatggacagaatgtttttaaagaaatatatgcccaca
ttaaatgaatatttgcactataggttaattgatgtgtctactattaaagagatctgcaga
agatggaatcctgatctgtacaaatcaattccaaagaaggaatatactcacagggcactt
caagacattaaggaaagtgtagaggaacttaaattttataaacagaacttccttaaattt
taa
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