Agrobacterium tumefaciens Ach5: Ach5_34480
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Entry
Ach5_34480 CDS
T03816
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf00300
Lysine biosynthesis
atf00470
D-Amino acid metabolism
atf01100
Metabolic pathways
atf01110
Biosynthesis of secondary metabolites
atf01120
Microbial metabolism in diverse environments
atf01230
Biosynthesis of amino acids
Module
atf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Ach5_34480 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Ach5_34480 (lysA)
Enzymes [BR:
atf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Ach5_34480 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AKC09221
UniProt:
A0AA86FZT2
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All DBs
Position
linear:818192..819460
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AA seq
422 aa
AA seq
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MNHFGYIDGVLHAENVPVPEIAKAVGTPFYVYSTATLERHYKVFSGAFADVDAMVCYAMK
ANSNQAVLRTLAKLGAGIDVVSGGELRRALGAGVPANRIMFSGVGKTVAEMDYALEAGIY
CFNIESEPELEVLNLRAVKAGKRAHVSFRINPDVDARTHAKISTGKKENKFGISYERARA
VYAHAATLPGIEVTGIDMHIGSQITELQPFEDAFRLLRELVESLRADGHTISHVDIGGGL
GIPYREDNNPPPLPDAYAHIVKNELKSLNCKIITEPGRLIVGNAGILVTEVIYVKDGGEK
NFVIVDGAMNDLIRPTLYEAYHGIRPVVQPAVDAPRIKADIVGPVCETGDYLALDREMAA
PQPGDLIAVSSAGAYGAVQAGTYNSRLLVPEVLVKGDKFHVIRPRGTYEELIALDSVPAW
LD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccattttggctatatcgacggcgtgcttcacgccgaaaacgtgcccgtgcctgag
atcgccaaggcggtcggcacgccgttctatgtctattcgaccgcgacgctggagcgccac
tacaaggtgttctcaggcgctttcgccgatgtggacgccatggtctgttacgccatgaag
gccaattccaaccaggccgttctgaggacgctggcaaagctcggcgcgggtatcgacgtg
gtatccggcggcgaattgcgccgcgcgcttggcgccggtgtaccggcaaaccgcatcatg
ttctccggcgtcggcaagacggtggcggaaatggattacgcgctggaagccggcatctac
tgcttcaacatcgaatccgagccggagcttgaggtcctcaacctgcgcgccgtcaaggcc
ggaaaaagggcgcatgtgtccttccgcatcaatccggatgtggatgcgcgcactcatgcc
aagatttccaccggcaaaaaagaaaacaagttcggcatttcctatgagcgggcgcgtgcg
gtctatgcccatgccgccactctgcccggcatcgaagtcaccggcatcgacatgcatatc
ggcagccagatcacagaattgcagcccttcgaggatgcgttccgcttgctgcgcgaactg
gtggaatccctgcgcgcggacgggcacacgatcagtcacgtcgatatcggcggcggcctc
ggcattccctaccgcgaggacaataatccgccgccgctgccggatgcctatgcgcatatc
gtcaagaacgagctaaagagcctcaactgcaagatcatcaccgaaccgggacgcctgatc
gtcggcaatgccggcattctggtgacggaagtgatctatgtgaaggatggcggcgaaaag
aacttcgtgattgtcgatggcgcgatgaacgacctcatccgcccgacgctttacgaggcc
tatcacggcatccgcccggtcgtgcagcccgcggtggacgcccctcgcatcaaggccgat
atcgttggccccgtctgcgaaacgggtgactatctggcgctggaccgcgagatggccgca
ccgcagccgggtgatctgattgccgtcagctccgccggtgcttacggcgccgtgcaggca
ggcacctataattcgcgcctgctggtgccggaagtgctggtaaagggtgacaagttccac
gtcatccgcccgcgcggaacctatgaagagctgatcgctctcgattcagtacccgcctgg
ctcgattga
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