KEGG   Arabidopsis thaliana (thale cress): AT1G04820Help
Entry
AT1G04820         CDS       T00041                                 

Gene name
TUA4
Definition
(RefSeq) tubulin alpha-4 chain
  KO
K07374  tubulin alpha
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04145  Phagosome
Brite
KEGG Orthology (KO) [BR:ath00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    AT1G04820 (TUA4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ath03019]
    AT1G04820 (TUA4)
   03036 Chromosome and associated proteins [BR:ath03036]
    AT1G04820 (TUA4)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ath04812]
    AT1G04820 (TUA4)
   04147 Exosome [BR:ath04147]
    AT1G04820 (TUA4)
Messenger RNA biogenesis [BR:ath03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     AT1G04820 (TUA4)
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     AT1G04820 (TUA4)
Cytoskeleton proteins [BR:ath04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    AT1G04820 (TUA4)
Exosome [BR:ath04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   AT1G04820 (TUA4)
  Exosomal proteins of other body fluids (saliva and urine)
   AT1G04820 (TUA4)
  Exosomal proteins of colorectal cancer cells
   AT1G04820 (TUA4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Motif
Other DBs
NCBI-GeneID: 839405
NCBI-ProteinID: NP_171974
MIPS: AT1G04820.1
TAIR: AT1G04820
Araport: AT1G04820
UniProt: B9DGT7 Q0WV25 A0A178W5L2
LinkDB All DBs
Position
1
AA seq 450 aa AA seqDB search
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTA
SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPAS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEGGDDEDDEGEEY
NT seq 1353 nt NT seq  +upstreamnt  +downstreamnt
atgagagagtgcatttcgatccacattggtcaggctggtatccaggtcggaaatgcttgc
tgggagctgtactgtcttgaacatggcattcagcctgatggccagatgccgagtgacaag
actgttggtggaggtgacgatgctttcaacaccttcttcagtgaaaccggtgcaggtaag
cacgtcccacgtgctgtctttgttgatcttgagccaactgtgatcgacgaggtcaggact
ggtacttaccgtcagcttttccaccctgaacaactcatcagcggtaaagaagatgcagct
aacaatttcgcccgtggtcattacaccattgggaaagagattgttgacctgtgcttagac
cgtatcagaaagcttgctgataactgtactggtctccaaggattcctcgtcttcaacgct
gttggtggagggactggatctggtcttggatctctcctccttgagagactttctgttgac
tacgggaaaaagtccaagttgggtttcacagtttacccatctccacaggtctctacctcc
gttgttgagccttacaacagtgtcctctccactcactctctcttggaacacactgatgtc
tccatcctcctcgacaatgaagctatctatgacatctgcagacgctccctaagcattgag
agaccaacctacaccaacctcaaccgcctcgtctctcaggttatttcttccttgactgct
tctctgaggtttgatggtgccttaaatgttgatgtcactgagttccaaaccaacttggtc
ccatacccaagaatccacttcatgctttcctcctatgccccagtcatctccgcagagaaa
gccttccatgagcaactctcagttgctgagatcacaaacagtgcttttgagccagcttcc
atgatggctaagtgtgacccacgtcacggaaagtacatggcttgctgtttgatgtaccgt
ggtgatgttgtccccaaggatgtaaacgcagctgttggcaccatcaagaccaagcgcact
attcagtttgttgactggtgtcctactggattcaagtgtggtatcaactaccagccacca
acagttgttccaggaggtgatcttgctaaagtccagagagctgtttgcatgatctcaaac
tcgaccagtgttgctgaggtgttctcccgtattgatcacaagtttgatcttatgtacgcc
aaacgtgctttcgttcactggtatgtgggtgagggtatggaagaaggagaattctcagag
gcacgtgaggatcttgcagcattggagaaggattatgaagaggtcggtgctgaaggtggt
gacgatgaagatgatgaaggagaggaatactaa

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