Arabidopsis thaliana (thale cress): AT1G33410
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Entry
AT1G33410 CDS
T00041
Symbol
SAR1
Name
(RefSeq) SUPPRESSOR OF AUXIN RESISTANCE1
KO
K14303
nuclear pore complex protein Nup160
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AT1G33410 (SAR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT1G33410 (SAR1)
03036 Chromosome and associated proteins [BR:
ath03036
]
AT1G33410 (SAR1)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
AT1G33410 (SAR1)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
AT1G33410 (SAR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup160
DUF5311
Motif
Other DBs
NCBI-GeneID:
840234
NCBI-ProteinID:
NP_001185129
TAIR:
AT1G33410
UniProt:
Q9C811
A0A178WF46
LinkDB
All DBs
Position
1:complement(12109561..12118861)
Genome browser
AA seq
1504 aa
AA seq
DB search
MEENRRNPSAGMEVPVAGGGNVVKWIEISVPSPSVSSSSIGANSSEDNECVQLPLSEDYA
SSSVIGEPSISFVWRINKTSPNALELLQLSAKSGFPITGLRFVFAQTLSPFAFVYADEGG
DSGRLVYFLYSLTPSGVVYVLKLSNTLAYKSGSVFPLDHLIHLDVRPYLNESRVTSVAAS
PGFIFLGRSDGCVSCFQPIVYFQKSSGFHQELRDDTGFGRLWGFVRLQCRGTVVAAVQDL
FISEVHGRNYLCVLHADGALRVWDILTYSRVLCQSIAAKNLEGVMCVRLWLGKADYDSGI
IPLAVLYRKSMNDSMDVITVYGLHFSSAEGIALSLDSGLQNIPLEEGELRDVRFTSDKIW
TLKANELTSYMLCQKSSTMEAQSYTLQEDYISEQLFLSSRSSSHDLLLTTHSLFSSAKDQ
IMGFISSIFLRRLLCPGIFHNVALRLTLLDHNKNWTDSEFQSLSLDELTSEILLLVEHEV
TAETSISVFHWWKNFCTSYLHHWCSNNEPRTLLVQSDVIGLVRNNSVSLFFRLENAEHSL
GGSSSEHSNLTSLDLGVSHSDHEILAEVLRCTSKISKQWGGAPYAMYYESITGRPIISSD
EIVPRLVNILESGYSTTIGQRTWSDLGADRAWEKELEAHKNLRTFSIDMLLSLSALCQRA
GSWEKVFTIMEHYLQYLVPKKSMQKNDGEALSDICSSILVQATSQFVKVMFESAFDIFLL
ISYLLNIAGQVNMSQQDICKLRLELLPMIQDIVSEWLIILFFVTTPAESTSMEDFSLKLS
SLQIDSSIDKRSWNAMLGKCGFSLAFILLFSDRSCIVDGRFNLRYLPSSQIITSLVQNFI
SWIRYSKTGDDSSSLLRRSTELSLRLIRNGQSDAVERILVVVEASLRGEKTFGCSQDTSG
DWCLLQHLRGCCLLDQVQRGASGILRERKIIDAIRCFFRASSGEGSWKALHSLSKEAGFS
PATTGPSILDGSTSSAAWKLHYYEWAMQIFERYNISEGACQFAYAALEQVDDAYNFIEMT
EEFDPTKAATYTRGRLWANVFKFTLDLNLLNDAYCAIISNPDEEIKRICLRRFIIVLFEC
GKTKILSDGHLPFIGLTEKITQELFWKAGRSDIMMKPNPYKLLYAYEMRRHNWRMAASYM
YQFSARLRSEGACKDYKHMSLVLQERLNGLSAAMNALALVHPGYAWIDPVPEETTRYPVK
KARRAEEEQLRSNDQPKGEKSCIDIEKLQNEFVFTTAEYMLSLKNFGWTYSGLEKPPSDL
VDLLVQANLYDMAFTVVLKFWRGSALKRELEKIFENMAIKCCPAKGTLWSSPNLMLTSND
EEVTHSPDRSPADQGSKLAGDWEILEVYLKRYIDIHARLPVSVASTLLQADSCIELPLWL
IQMFKDGQKEKALGMAGQEASPASLFQLYVDYGRLTEATNLLLEYMESFASSKPAEVLKR
KKVSGVWFPYTTVERLWWELEKTMNSGRMVEQCHKLKEQLHHALLNHLKLLKVDSNDAVS
SATG
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaatcgtcggaatccgtcggccggtatggaagttccagttgccggcggcgga
aatgtcgtcaaatggattgagatatctgttccttcaccttctgtttcatcttctagtatc
ggtgctaattcaagtgaggacaatgagtgtgttcagcttcctttgtctgaagactacgct
tctagctctgtaattggggaaccttcgatctctttcgtttggagaatcaacaagacgagt
ccaaatgctctcgagcttcttcagctctcagctaagtctggatttccaataacaggactg
cgtttcgtctttgctcagactctttctccttttgcttttgtatacgccgatgagggtggt
gatagtggtcgtcttgtctactttctttactctctcacgccgtctggtgttgtctacgtt
cttaaactctcgaatacgttagcatataagtctggttcagtcttcccgcttgatcatttg
attcacttggatgttcgaccttacttgaacgagagtcgtgttactagtgttgctgcatcg
cctggtttcatttttctcgggaggtccgatggttgtgtctcttgcttccaacctattgtg
tattttcagaaatcttcaggtttccaccaggagctgcgtgatgatacaggatttggtcgt
ctgtggggattcgtaagattgcaatgcagggggacagttgttgcagccgtgcaagattta
tttatatcagaagttcatggaagaaattatctatgtgtgcttcatgctgacggggcatta
cgtgtctgggatattttgacttatagcagggttttatgtcagagtatagctgctaagaac
cttgagggggttatgtgtgtgaggttatggttgggcaaagctgattacgattctggcatc
attccattagctgtcttgtatagaaagagtatgaatgacagcatggacgtgatcactgta
tatggcctgcactttagttctgcggaggggatagctttgtctctagattctggattacag
aatataccactggaagagggggaattgcgggatgtcagatttacatccgacaagatctgg
actctaaaggccaatgaattaacatcttacatgttgtgccagaaatctagcaccatggaa
gcgcagtcttacacgttgcaggaagactacatttctgaacagctatttctgagttctagg
agctcttcacatgatcttcttttgactactcattcactgttttcatccgcaaaggatcaa
attatgggattcatttcgtcaatcttcttacgcaggcttctttgtcctggaatttttcac
aatgttgccttacgtctaactttactggaccacaacaaaaactggactgattccgagttt
caatctttaagtcttgatgagcttacaagcgagattcttttactggttgagcatgaggtt
acagctgaaacttctatttcagtttttcattggtggaaaaacttttgtacatcctatctc
catcattggtgcagtaataatgaacctcgcacgttgttggttcagtcagatgttattggt
ttagttagaaataattctgtatcactgttttttagattggagaacgctgagcacagcctt
ggaggttcttcctccgaacacagcaacctgacgagcttagacttgggcgtgtctcacagc
gaccatgaaattctggcagaggtactaagatgtacttcgaagatcagtaaacagtggggt
ggtgctccttatgccatgtattatgaatcaattaccggaaggccaattatctcatcggat
gaaatcgttcctcgcttagttaacatccttgagtcgggatattctacgaccataggtcaa
cgtacttggtcagatcttggtgctgatagagcatgggaaaaagagctagaagctcataaa
aatcttagaacattctccattgacatgctgctgtctctctctgctctatgtcaaagggct
ggatcttgggaaaaagtctttactatcatggagcactatttgcagtatttggtccctaaa
aaatctatgcagaaaaatgatggtgaggcattatctgatatctgtagttctatcctcgtc
caagccacttctcagtttgtaaaggtgatgtttgagtcggcatttgacatcttcctactc
atcagctatctgcttaacatcgctgggcaggttaatatgtcacagcaagacatatgcaag
ctacggcttgagttgcttccaatgatccaagatattgtctcagagtggctcatcatcctt
ttctttgttaccactccagctgagtcaacttctatggaagatttcagcttgaaactttca
tctctacagattgatagcagcattgacaaaagatcatggaacgcaatgctagggaaatgt
ggtttctcactggcgtttattcttctctttagtgaccgaagttgcattgtggatggccgc
tttaacttgagatatcttccgagttcacaaatcattacaagtttggtgcaaaactttatc
agctggattcggtatagtaaaacaggagatgactcttcttcactgctaagacgctccacg
gaacttagtcttaggttgattcggaatggacaatctgatgctgttgagcgaatccttgtg
gttgtggaggcaagtttacgtggggagaaaacatttggatgttctcaagatactagtgga
gattggtgtcttcttcaacatctccgtggttgttgccttcttgatcaagtacaacgtggt
gcaagtggcatattaagagagagaaagattattgatgccatccgctgcttcttcagagct
tcatcaggtgaaggatcttggaaggctttgcacagcttgtctaaagaagcaggattttca
cctgccacaacgggtccaagtattttagatggttctacgtcttctgcagcatggaaactt
cattactatgagtgggctatgcaaatttttgaacggtacaatataagtgaaggagcttgt
cagtttgcctatgcagcccttgagcaagtagatgatgcctataatttcatagagatgact
gaggaattcgatccaactaaagcagccacctacactagaggacgactgtgggcaaatgtt
ttcaagttcaccttagatctcaatctcttgaatgatgcctactgtgctataatttcaaac
cctgatgaggagattaagcgcatctgtttgaggcgcttcataatagttctatttgaatgt
ggcaaaacgaagatcctcagtgatggacatctacctttcatcggcttaacagagaagatc
acccaagagcttttttggaaggccggacgttctgatataatgatgaagccaaatccatac
aagctgctttatgcttatgagatgagacgacacaattggcgaatggcggcaagttacatg
tatcagttttctgcccgtttgagaagcgagggagcatgcaaggattacaaacacatgtcc
ctagttttgcaagagaggcttaatggactttctgctgctatgaatgcattagcccttgtt
catcctgggtatgcttggattgatccagtaccagaagaaaccacacgttatccggttaaa
aaggctagaagagcagaagaagaacaattaaggagtaatgaccagcccaaaggggagaag
agttgcattgatatcgagaaactccaaaacgagtttgtttttactactgctgaatatatg
ctttctctgaaaaatttcgggtggacatattcaggactcgaaaagccaccatcagatttg
gttgaccttcttgtccaggcaaacttgtatgacatggcattcactgttgttttgaaattt
tggaggggctccgctttgaaaagggagctggaaaagatatttgagaatatggcaattaaa
tgttgccctgctaaaggaactctgtggtcatcgcctaatcttatgttaacatctaacgat
gaagaagttactcattcgcctgatagaagccctgctgatcagggctctaagttggctggt
gattgggaaattcttgaggtttatctgaagaggtacatagacatacacgctagactaccg
gtttctgttgcttcaacccttcttcaagcagattcttgtatcgaattgcctctctggctg
attcaaatgttcaaggatggtcagaaggaaaaagctttgggaatggctgggcaagaagca
agtcctgcttccttgtttcagttatatgttgattatgggcgtcttacagaggcaactaat
ttgctacttgagtacatggaatcatttgcttcatcgaaaccagcagaggtattgaagagg
aaaaaggtatccggagtttggtttccgtacacaacagtagaaagactatggtgggagcta
gagaaaacaatgaactcaggacgaatggtggagcaatgccataagctgaaggaacaactt
catcatgcattactcaatcacttaaaactgcttaaggtggactcaaatgatgctgtatcc
tctgcaaccggttaa
DBGET
integrated database retrieval system
