Arabidopsis thaliana (thale cress): AT1G42540
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Entry
AT1G42540 CDS
T00041
Symbol
GLR3.3
Name
(RefSeq) glutamate receptor 3.3
KO
K05387
glutamate receptor, ionotropic, plant
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ath04040
]
AT1G42540 (GLR3.3)
Ion channels [BR:
ath04040
]
Ligand-gated channels
Glutamate (ionotropic)
AT1G42540 (GLR3.3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
SBP_bac_3
Lig_chan-Glu_bd
Ctr
Motif
Other DBs
NCBI-GeneID:
840859
NCBI-ProteinID:
NP_001322170
TAIR:
AT1G42540
UniProt:
Q9C8E7
Structure
PDB
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Position
1:15973054..15976813
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AA seq
933 aa
AA seq
DB search
MKQLWTFFFLSFLCSGLFRRTHSEKPKVVKIGSIFSFDSVIGKVAKIAIDEAVKDVNSNP
DILSGTKFSVSMQNSNCSGFMGMVEALRFMEKDIVGIIGPQCSVVAHMISHMANELRVPL
LSFAVTDPVMSPLQFPYFIRTTQSDLYQMDAIASIVDFYGWKEVIAVFVDDDFGRNGVAA
LNDKLASRRLRITYKAGLHPDTAVNKNEIMNMLIKIMLLQPRIVVIHVYSELGFAVFKEA
KYLGMMGNGYVWIATDWLSTNLDSSSPLPAERLETIQGVLVLRPHTPDSDFKREFFKRWR
KMSGASLALNTYGLYAYDSVMLLARGLDKFFKDGGNISFSNHSMLNTLGKSGNLNLEAMT
VFDGGEALLKDILGTRMVGLTGQLQFTPDRSRTRPAYDIINVAGTGVRQIGYWSNHSGLS
TVLPELLYTKEKPNMSTSPKLKHVIWPGETFTKPRGWVFSNNGKELKIGVPLRVSYKEFV
SQIRGTENMFKGFCIDVFTAAVNLLPYAVPVKFIPYGNGKENPSYTHMVEMITTGNFDGV
VGDVAIVTNRTKIVDFTQPYAASGLVVVAPFKKLNSGAWAFLRPFNRLMWAVTGCCFLFV
GIVVWILEHRTNDEFRGPPKRQCVTILWFSFSTMFFAHRENTVSTLGRLVLIIWLFVVLI
INSSYTASLTSILTVQQLSSPIKGIESLRERDDPIGYQVGSFAESYLRNELNISESRLVP
LGTPEAYAKALKDGPSKGGVAAIVDERPYVELFLSSNCAYRIVGQEFTKSGWGFAFPRDS
PLAIDLSTAILELAENGDLQRIHDKWLMKNACTLENAELESDRLHLKSFWGLFLICGVAC
LLALFLYFVQIIRQLYKKPTDDAIARDQQQNHDSSSMRSTRLQRFLSLMDEKEESKHESK
KRKIDGSMNDTSGSTRSRGFDRERSFNSVNPLD
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaactctggactttcttcttcttgtctttcctttgtagtggattgttcagaaga
acacattctgagaaaccaaaagttgtgaaaatcggttctatattcagttttgattcagtt
attggcaaagttgctaagatcgctattgatgaagcagtaaaagatgtgaattcaaatcca
gacattctcagcggaacaaagttttctgtttcgatgcaaaactctaactgcagcggtttt
atgggcatggttgaagcattgaggtttatggagaaagatatagttgggattataggacca
caatgttctgtagtagctcatatgatatctcatatggctaacgaacttcgtgtaccgctt
ctttcgtttgctgtaaccgatcccgtaatgtcgccgttacagtttccgtatttcattagg
actactcagagtgatttatatcaaatggatgcaatagcatccattgtagatttttatggt
tggaaagaagttattgctgtgtttgttgatgatgatttcggtaggaacggtgttgctgcg
ttgaacgataagcttgcgagtaggagattgagaattacttataaggcgggtttacatcct
gacacggctgttaataagaatgagatcatgaacatgctgataaagatcatgttgcttcaa
ccgaggattgttgtgatacatgtttattcggagttggggttcgcggtttttaaggaggct
aagtatcttggaatgatgggaaatggatatgtttggatcgctacggattggctctctacg
aatcttgactcttcttcgccgttacccgctgagaggttggaaactattcaaggtgttctt
gttctgcgtccacacacgccggattcggattttaaacgggagtttttcaagaggtggcgt
aagatgtctggtgcttctttggctcttaatacatatggactctatgcttatgattctgtt
atgttgttagcccggggtttagataagttctttaaagacggtgggaatatatcgttttcg
aatcactcaatgctcaatacgttgggaaaaagcggaaatctcaacttagaggctatgact
gtctttgatggtggagaagcactgcttaaagatatcctcggaacgcgtatggttggttta
acgggacagcttcagttcactccagacaggtctcggacccgtccagcttacgatattatc
aatgtggcgggaaccggtgttcgtcaaataggctactggtcaaatcattctggtttatca
actgtattacctgagttactctacacaaaggagaaaccaaatatgtcaacaagtccgaaa
ctaaagcatgtcatttggccgggagaaacgtttacgaaacctcgcggatgggttttctct
aacaatgggaaagaactcaagattggcgtgcctcttcgcgttagttacaaggagtttgta
tcacaaattcgcggaaccgagaacatgttcaaagggttttgcattgatgtcttcacggct
gcagtgaatcttttaccgtacgcagttcctgtcaagtttattccttatggaaatggaaag
gagaatccgagctacacgcatatggttgagatgataacaactggtaattttgatggggta
gtaggtgatgttgccattgtaacaaaccggacaaagattgtagatttcacacaaccatat
gcagcatcaggactagttgtagttgcaccttttaaaaaactgaattcaggagcctgggct
tttcttcgacctttcaaccgtcttatgtgggctgtcacgggttgttgctttctctttgtt
ggcattgttgtttggatcttggaacataggactaacgatgaattcagaggcccacctaag
agacaatgtgtcacaattctctggtttagcttctcgaccatgtttttcgcgcatagagag
aacacagttagtacacttggacggttggttctgatcatatggctattcgttgtactaatc
atcaactcgagctacacggctagtctgacatcgatattgacggttcagcagctctcttca
cccatcaagggaattgaaagccttagagaaagagatgatccaatagggtaccaggttggt
tcatttgcagagagttatttgaggaacgaactcaacatatcagagtcacgcctagtccca
cttggaacacctgaagcctatgctaaggcattaaaagatggaccaagcaaaggaggcgtt
gccgcgattgttgacgaacgtccttatgtcgaactcttcctctccagcaactgcgcttat
agaatcgttggtcaagagttcaccaaaagtggctggggatttgcctttcctagagactct
cctctagcaatagatctatcaacagcgatcttagagctagcagagaacggagatttgcaa
aggatccacgacaaatggctaatgaagaacgcatgcactctagagaacgcggagctcgaa
tcagacaggcttcatctaaaaagcttttggggactatttctcatatgcggcgtcgcgtgc
ctcctcgctctcttcctatactttgttcagatcatccgtcagctctataaaaagccaacc
gatgatgccattgcaagagatcaacagcagaatcatgactcttcctccatgcgctccact
cgtttgcaaagattcttgtctctcatggatgagaaagaagagtccaagcacgaaagcaag
aagagaaagatcgatggttcaatgaacgatacatcgggatcaacacgatcacgaggtttc
gatagagaaagaagcttcaattcggtaaatccattagactga
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