Arabidopsis thaliana (thale cress): AT1G49250
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Entry
AT1G49250 CDS
T00041
Name
(RefSeq) ATP-dependent DNA ligase
Organism
ath
Arabidopsis thaliana (thale cress)
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
DM10_dom
Motif
Other DBs
NCBI-GeneID:
841349
NCBI-ProteinID:
NP_175351
TAIR:
AT1G49250
UniProt:
F4I1P7
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Position
1:18220533..18224325
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AA seq
657 aa
AA seq
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MSNASAKKKRKLEETVDTPPTRVDDKTLVLISDSKKPKSDRVTKLKSKIGLLKKKPTESG
RIVITHILCNMLRTVIATTPDDLLPTVYLAANEIAPAHEGIKLGMGKGSYIIKAISEAFG
RTESHVEQQYTQLGDLGLVANGSRSSQTMIFMPKPLTVVKVADTLRLIAKESGKGSKDKK
KDLMKALLVATTDCEPLYLTRLLQDNLRLGFSRQTVLAALGQAAVYNEEHSKPPPNIKNP
LDEAATIVKEVFSMLPVYDIIVGALLTSGVWNLPKTCNLTLGVPVRPMLAKATTRVDLIL
EKFKDTVFTAEYKYDGERAQIYYMEDGTVEIFSRHAERNTGKYPDVALVLSRLKKPTVKS
FILDCEVVTFNREKEKILPLQSTRAHKNVNVSDIKVGVCVFAFDILYLNGQLLIHENLNI
RREKLHDSFEEDLGYFQFATALTSNDIGELQEFLKASIDIGCEGLMIKSLYSNATYEPAK
RSNNWLKLKKDYMDNIGDSVDLVPIATFHGRGKRTGFFGAYLLACYDVDKEEFQSICKIG
TEFSDVELQDLSSSLCSKVIATPKQYYQVDNDLNPDVWLEPTEVWEVKAADLTVSPVYRE
AIGIVDPDKGISLRFPRLVRIRKDKNPEEATTSDQIAEMYQAQKHNQPSNQGKVDDD
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatgcttccgccaagaagaagagaaaactcgaggaaaccgtagatacgccaccg
actagggttgatgacaaaaccctagttcttatttctgattcgaaaaaacccaaatcagat
agggttaccaaactgaagagcaaaattgggttgctgaagaagaagccaactgaaagtggc
aggattgtcatcactcatattctgtgtaacatgttgagaaccgttatcgccactactcct
gatgatttgctacctactgtttatcttgctgcaaatgagattgcccctgctcatgaaggt
attaaattgggaatgggtaagggttcctacattattaaggcaatctctgaagcttttggt
agaactgagtcccacgttgagcagcaatatacgcaactgggagacttggggcttgtagca
aatgggagccgttcctctcagactatgattttcatgcccaaaccattaactgttgtcaag
gttgctgatacacttcgcctaattgctaaggaatctggaaaaggtagtaaggataagaag
aaggatctaatgaaggcacttcttgtggcaactacagattgtgaacctctttacttaact
cgtttacttcaggataatttgcggttagggttctcacgtcaaactgttttagctgccttg
ggacaggctgctgtatataacgaagagcattctaagccgcccccaaatatcaagaatcct
ttagatgaggctgcaacgattgttaaagaagtattctcaatgcttcctgtctatgacatt
attgttggtgctcttctaactagtggtgtatggaatcttcctaaaacttgtaacctcaca
ctcggtgttccagttaggcccatgcttgcaaaagcaactacaagagtagatctcatactt
gagaaattcaaggacactgttttcacagctgaatacaaatatgatggtgaacgtgcacag
atatattatatggaggatggtacagtcgagatattcagtagacatgctgaaagaaacact
ggcaagtaccctgatgttgctcttgtgttatcaaggttaaagaagcccactgtgaaatct
tttattctggattgcgaggttgtcaccttcaacagagaaaaagagaaaattcttccactc
cagagtacacgagcccataaaaatgtgaatgtcagtgatatcaaggttggcgtatgcgtc
tttgcttttgatatattatacctaaatggccaactacttatccatgagaatctgaacatt
cgccgagagaagctacacgattcatttgaggaagatcttgggtatttccagtttgcaact
gctctaacatccaacgatattggtgaattacaagagtttcttaaagcttctattgacata
ggatgtgaaggtttaatgataaagtcattgtactcaaatgcaacctatgagcctgcaaag
agatcaaataattggctaaaactgaagaaggactatatggacaacattggagattccgtg
gatcttgtaccaatagctacgttccatggacgtgggaaacgcacaggtttctttggtgca
tatttactagcgtgctacgatgttgataaggaagaattccagagcatttgtaaaattggt
actgaattttctgatgtggagcttcaagatttgtcttccagtctttgctctaaagtgatt
gctactccgaaacaatactaccaagtcgataacgatctcaatccagatgtctggttggag
cccaccgaggtgtgggaagtgaaagcagctgacttgacagttagccctgtatatcgtgaa
gctattggaattgtggaccctgacaagggaatttctctacgatttcctcgtctagtccgt
atacggaaagacaagaatccagaggaagcaacaacatctgaccagattgctgaaatgtat
caagctcagaaacacaatcaaccaagcaatcaaggcaaagtggacgacgattga
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