Arabidopsis thaliana (thale cress): AT2G45000
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Entry
AT2G45000 CDS
T00041
Symbol
EMB2766
Name
(RefSeq) structural constituent of nuclear pore
KO
K14306
nuclear pore complex protein Nup62
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AT2G45000 (EMB2766)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT2G45000 (EMB2766)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
AT2G45000 (EMB2766)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
ATG17_like
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
819108
NCBI-ProteinID:
NP_850429
TAIR:
AT2G45000
UniProt:
Q8L7F7
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Position
2:18564017..18567892
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AA seq
739 aa
AA seq
DB search
MSGFPFGQSNSVGGFSFGSSSATNSSSASSTTSPLSFSFNQSSNPSSTGFGFGSSVSSTP
ASSTTPSFGFGASSTPSFGFGSSASSSTPSFGFGSSASVTPASTTPSFGFGTAASSSAPA
PSLFGSSTTNASSAAPGSSPFGFVTSSASSTATPSSSLFGAPASSAATPSSSPFGAAPAS
GSTPLFGSSPSLFSAPSSASASNSSLFGASSSAATSTSPLFGAPSSATGATPSFSVASSA
PGSSSSIFGATGSSPSFSVASSASGSSPSIFGATGSSPFFGSSSSAGSTPSLFASSSSGA
TTSSPSPFGVSTFNSSSTSNTSNASASPFSASTGFSFLKSTASSTTSSTTPSAPPQTASS
SSSFSFGTSANSGFNLSTGSSAAPASSTSGAVFSIATTTTTSSSTPAATSAPASSAPAST
MAFPSFGVTSSATNTTPASSAATFSTTGFGLASSTPATGSTNSFTGFAVPKTSTPASSSQ
PQTTSPAFSFSLPSSTSTTAPATSSATTTQTTLVVPSSSGTSTAVAPVAGSPKLPSEITG
KTVEEIIKEWNTELQERTGRFRKQANAIAEWDKRILQNRDVLLRLEIEVAKVVETQSSLE
RQLELIETHQQEVDKALQSMEEEAERIYNDERKSLLDDEAASTRDAMYEQSELVERELEH
MTEQIRSIIQSVNANQGGELEAIDGMSPLDVVVRILNNQLSSLMWIDEKAEEFSSRIQKI
ALQGSGGDRELMAPKHWMS
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggtttccatttggtcaatccaattccgttggaggattctcattcggatcttct
tctgcaactaattcctcttctgcttcatctaccacttctccgttatctttctcctttaac
caatcttcaaaccctagctccaccggattcggtttcggatcctccgtatcatcaactcct
gcttcctccactactccatcgtttggattcggagcttcctctactccttccttcggattc
ggttcttctgcttcttcatcgactccatcgttcggattcggatcttctgcctccgtgact
cctgcttccacaactccatcgtttggatttggaaccgccgcttcttcatctgctcctgct
ccgtcgctgtttggttcatctaccaccaatgcttcttcagctgctcctggttcttctcct
ttcggatttgtaacttcctcggcctcttccaccgcaactccatcgtcatctctatttgga
gctcccgcttcttccgccgcaactccatcgtcatctccattcggagctgctccagccagt
ggttcaacacctctctttggatcttccccttccttattctctgctccttcatctgcctcc
gcctctaattcttctctcttcggagcatcctcatccgccgctacttcaacatctcctctt
ttcggcgcgccatcatcagccaccggcgcaacaccgtcctttagcgtggcctcatcagca
cctggctcctcatcatccatctttggagctaccggctcgtcaccttccttcagtgttgcc
tcatcagcctctggctcctcaccgtcaatctttggagctaccggttcttcaccgttcttt
ggttcgtcttcttcagccggttcaactccgtctctctttgcatcttcctcgtcaggcgca
acaacttcttcaccatccccgtttggagtatccaccttcaattcctcatctacatccaat
acctcgaatgcctcagcttctccattctccgcttctaccgggttctctttcttgaaaagc
actgcaagttcgaccaccagctccaccactccttctgctcctccacaaacggcttcatct
tcgtcctccttctcatttggtacatccgccaattcaggttttaacctttcaaccggaagc
tccgcagcacctgcatctagcacatccggagcagtgttttccattgcaaccaccactact
acttcttcttcgactccggctgctactagtgcaccagcttcttcagctcccgcttctaca
atggctttcccttcttttggtgtgacttcatctgcaaccaacaccactccggctagctcc
gctgctacattcagtactacaggatttggtttggctagctcgactcctgccactggatct
acgaactcttttactgggtttgctgtaccgaagacatcaacacctgcatcatcttcacaa
ccacaaactactagtcctgcattctcattcagtctcccatcttcgacttctactactgct
cctgctactagttctgctactacaacacagacaactcttgttgttccttcaagtagtggg
acgagcacagctgttgctccagtggctggttctccaaagttgccatctgaaataactggc
aaaactgttgaggagattatcaaggagtggaatactgagctacaagagcgcacagggaga
ttccggaaacaggcaaatgcaatagcagagtgggataagcggatcttgcaaaaccgtgat
gttcttttgagacttgagattgaagttgcaaaagtggttgaaacccaatctagcttggaa
cgacagctggaattaatcgagactcatcagcaagaggttgacaaggctttgcaaagcatg
gaggaagaggctgagcgtatatataatgacgagcggaaatcacttctggacgatgaagca
gcatcaactagagatgcaatgtatgaacagtctgagctagtagaaagagaactggagcat
atgactgaacaaatcagatcgattatacaatccgtaaatgcaaaccagggtggagaactt
gaagcgatagatgggatgagtccacttgatgtagttgtcagaatcttgaacaatcaactc
agttccttaatgtggattgatgagaaagcagaggaattctcttctcggattcaaaaaatc
gcattgcaaggttcgggtggagatcgtgaattgatggctccaaagcactggatgtcttga
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integrated database retrieval system
