Arabidopsis thaliana (thale cress): AT3G11910
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Entry
AT3G11910 CDS
T00041
Symbol
UBP13
Name
(RefSeq) ubiquitin-specific protease 13
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
AT3G11910 (UBP13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ath01002
]
AT3G11910 (UBP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT3G11910 (UBP13)
Enzymes [BR:
ath01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
AT3G11910 (UBP13)
Peptidases and inhibitors [BR:
ath01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
AT3G11910 (UBP13)
Ubiquitin system [BR:
ath04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
AT3G11910 (UBP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
RA
ubiquitin
SASP
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
820364
NCBI-ProteinID:
NP_001326292
TAIR:
AT3G11910
UniProt:
Q84WU2
A0A178VEE0
LinkDB
All DBs
Position
3:complement(3760724..3770563)
Genome browser
AA seq
1115 aa
AA seq
DB search
MTMMTPPPLDQQEDEEMLVPNPDLVEGPQPMEVAQTDPAATAVENPPPEDPPSLKFTWTI
PMFTRLNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAANLPYGWSRYSQFS
LAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYLVNDTVLIEAEVAV
RKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTAS
IPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTV
VEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEG
DNKYHAEGHDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDR
EDGRYLSPDADKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDV
KRALEEQYGGEEELPQNNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEH
LRVRLKKEQEEKEDKRKYKAQAHLFTTIKVARDDDITEQIGKNIYFDLVDHEKVRSFRIQ
KQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLSPNEELQTVGQIREASNK
ANNAELKLFLEIERGPDDLPIPPPEKTSEDILLFFKLYDPENAVLRYVGRLMVKSSSKPM
DIVGQLNKMAGFAPDEEIELFEEIKFEPCVMCEQIDKKTSFRLCQIEDGDIICYQKPLSI
EESEFRYPDVPSFLEYVQNRELVRFRTLEKPKEDEFTMELSKLHTYDDVVERVAEKLGLD
DPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQGLK
TLKVAFHSATKDEVIIHNIRLPKQSTVGDVINELKTKVELSHQDAELRLLEVFFHKIYKI
FPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLIHVYHFTKEAGQNQQVQNFGEPFFL
VIHEGETLEEIKTRIQKKLHVPDEDFAKWKFASFSMGRPDYLLDTDVVYNRFQRRDVYGA
WEQYLGLEHIDNAPKRAYAANQNRHAYEKPVKIYN
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatgactccgccgccgctagatcagcaggaagacgaggagatgcttgttccg
aatccggatttggtcgagggacctcagcctatggaagttgcccaaactgatcctgctgct
accgctgtggagaatccaccacccgaggatcctccaagtctgaaattcacgtggaccatc
ccaatgttcactaggctcaataccaggaagcattactctgacgtatttgttgtaggcggt
tataagtggcgtatattgatttttcccaaaggaaacaatgtcgaccatttgtcaatgtac
ttggatgttgctgatgctgcgaatttgccgtacgggtggagcagatattcacagttcagt
ctggctgtagtgaatcaagtcaacaaccgatattccatcagaaaggagacgcaacatcaa
ttcaatgcaagagaaagcgactgggggtttacatcattcatgcctctcagcgagctctat
gaacccactcgaggatatttagtgaatgacactgttctgattgaagctgaagttgctgtg
cgtaaagttcttgattattggtcatatgactcaaaaaaagagacaggttttgttggacta
aaaaaccaaggtgctacctgttacatgaattctctcctgcagactttataccacatacct
tactttagaaaggctgtttaccacatgccaacgactgaaaatgatgcacctaccgctagt
atcccattggcgctccagagtttattttacaagcttcagtataatgataccagtgtagcg
acaaaggagctgacaaagtcgtttggttgggatacatatgattcttttatgcaacatgat
gtacaagaactcaacagagttctctgtgaaaagcttgaggacaagatgaagggaactgtt
gtggagggaacaatacaaaagctatttgaaggtcaccacatgaattacattgagtgcatt
aatgtagattacaaatctacacggaaagagtcattttatgacctccagcttgatgttaaa
ggctgcaaagatgtatatgcttcttttgacaagtatgttgaagttgaacgccttgaagga
gacaacaaataccatgcagaaggacatgatttgcaggatgcaaaaaaaggtgttctattc
atagactttccaccagttcttcaacttcagctcaagaggtttgaatacgattttatgagg
gacacaatggtgaagattaatgatcggtatgagtttcctctccaactggatctcgacaga
gaagatggaagatatttatcccctgatgcagacaagagtgtccgcaatctctacaccctc
cacagtgtcttggttcacagtggaggagtgcatggagggcattattatgcttttattagg
ccaacactttcagatcagtggtataaatttgacgatgaacgggtcacgaaagaagatgtc
aaaagagcactggaagagcaatatggtggtgaagaagagttaccgcagaataatcctggt
ttcaataatccacctttcaaattcacaaaatactcgaatgcatacatgcttgtttatatt
cgggaaagtgacaaggataagataatctgcaacgttgatgagaaagacattgcggaacat
ttgcgggtgaggctgaaaaaagaacaagaagaaaaggaagataaaagaaaatacaaggct
caagctcaccttttcacgacaatcaaggtcgcaagagatgatgacatcactgagcaaatt
ggaaagaatatatattttgatcttgttgatcatgaaaaagtgaggagttttcgaatccag
aaacagaccccctttcaacaatttaaggaagaggtagccaaagagtttggtgtcccggtt
caactacagcggttctggatctgggcaaagcgtcaaaaccatacttaccgccccaatcgt
cccctatcacctaatgaagaattacagacggttggacaaatacgagaggcatctaacaag
gcaaacaatgctgagctaaagctgtttttggaaatagagcgtggaccggatgaccttcct
attcctcccccagaaaaaacttctgaggatatccttcttttctttaaactctatgaccct
gagaacgcagtactaagatatgttggcaggctaatggtgaaaagttccagtaagcccatg
gatatagtagggcaattgaataaaatggctggttttgctcctgatgaggaaatagaactt
tttgaggaaataaagtttgaaccttgcgtaatgtgtgaacagattgataagaagacttct
ttcaggctgtgtcaaattgaagatggagatatcatttgttatcagaaacctctttctatc
gaggagagtgaatttcgatacccagatgtgccatcatttttggagtatgtacagaatcga
gagctggtgcgttttcgcacactggaaaaaccaaaagaggatgagtttactatggagctg
tcaaagctgcacacttatgatgatgtagtggaaagggtggctgagaagcttggccttgac
gatccatcaaaacttaggcttacatctcacaattgctactctcagcaacccaagcctcag
ccaatcaaataccgtggagtagatcatctttcagatatgttagttcactataatcagacg
tctgacatattgtattatgaagttttggatattcctcttccagaattgcaaggtcttaag
actctaaaagtagctttccatagtgccacaaaggatgaagtgataatccacaatatcaga
ctacctaagcagagtactgttggagatgttattaacgaactgaaaacaaaggtggagctt
tcgcatcaagatgcagaactgaggttacttgaggtctttttccacaagatctacaagatc
tttccatctactgaacgaattgaaaacatcaatgaccagtactggactttacgagcagag
gagatacctgaagaagagaagaatattggtcccaatgataggttaattcacgtatatcat
tttactaaagaggccggacaaaatcagcaagttcaaaattttggggaacccttctttttg
gtaatccacgaaggtgaaactttagaagaaatcaagacccgtatccaaaagaaactccat
gtccctgatgaggactttgccaagtggaagtttgcatcgttttcaatgggacgtcctgat
tacttgctggacacagatgttgtttataatcgctttcagagaagagatgtatacggtgcg
tgggagcagtatcttgggttggagcacattgataatgctcctaaaagggcttatgctgca
aatcagaaccgacacgcatacgagaagccggtgaaaatatacaattag
DBGET
integrated database retrieval system