Arabidopsis thaliana (thale cress): AT3G18524
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Entry
AT3G18524 CDS
T00041
Symbol
MSH2
Name
(RefSeq) MUTS homolog 2
KO
K08735
DNA mismatch repair protein MSH2
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AT3G18524 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT3G18524 (MSH2)
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
AT3G18524 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
ApoL
ATG17_like
Motif
Other DBs
NCBI-GeneID:
821383
NCBI-ProteinID:
NP_566804
TAIR:
AT3G18524
UniProt:
O24617
A0A654F8E8
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All DBs
Position
3:complement(6367941..6372685)
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AA seq
937 aa
AA seq
DB search
MEGNFEEQNKLPELKLDAKQAQGFLSFYKTLPNDTRAVRFFDRKDYYTAHGENSVFIAKT
YYHTTTALRQLGSGSNALSSVSISRNMFETIARDLLLERNDHTVELYEGSGSNWRLVKTG
SPGNIGSFEDVLFANNEMQDTPVVVSIFPSFHDGRCVIGMAYVDLTRRVLGLAEFLDDSR
FTNLESSLIALGAKECIFPAESGKSNECKSLYDSLERCAVMITERKKHEFKGRDLDSDLK
RLVKGNIEPVRDLVSGFDLATPALGALLSFSELLSNEDNYGNFTIRRYDIGGFMRLDSAA
MRALNVMESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLVDLNEIKTRLDIVQCF
VEEAGLRQDLRQHLKRISDVERLLRSLERRRGGLQHIIKLYQSTIRLPFIKTAMQQYTGE
FASLISERYLKKLEALSDQDHLGKFIDLVECSVDLDQLENGEYMISSSYDTKLASLKDQK
ELLEQQIHELHKKTAIELDLQVDKALKLDKAAQFGHVFRITKKEEPKIRKKLTTQFIVLE
TRKDGVKFTNTKLKKLGDQYQSVVDDYRSCQKELVDRVVETVTSFSEVFEDLAGLLSEMD
VLLSFADLAASCPTPYCRPEITSSDAGDIVLEGSRHPCVEAQDWVNFIPNDCRLMRGKSW
FQIVTGPNMGGKSTFIRQVGVIVLMAQVGSFVPCDKASISIRDCIFARVGAGDCQLRGVS
TFMQEMLETASILKGASDKSLIIIDELGRGTSTYDGFGLAWAICEHLVQVKRAPTLFATH
FHELTALAQANSEVSGNTVGVANFHVSAHIDTESRKLTMLYKVEPGACDQSFGIHVAEFA
NFPESVVALAREKAAELEDFSPSSMIINNEESGKRKSREDDPDEVSRGAERAHKFLKEFA
AIPLDKMELKDSLQRVREMKDELEKDAADCHWLRQFL
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggagggtaatttcgaggaacagaacaagcttccggagctgaaattggatgcaaagcaa
gctcaagggtttctctcgttctacaaaaccctaccaaatgatacgagagctgttagattc
tttgatcgcaaggattattatacagctcatggtgaaaattcagttttcattgcaaagact
tattatcatacaaccactgctctacgtcagctcgggagtggttcaaatgctctttcaagc
gtaagcattagtaggaacatgttcgaaacgattgctagggatcttctcctggagcgtaat
gatcatactgtagaactttatgagggaagcggatcgaattggagacttgtgaaaacaggt
tctcctggaaacattggaagctttgaagatgttttgtttgcaaacaatgaaatgcaggac
acaccagttgttgtctccatatttccaagttttcacgatggcagatgcgttattgggatg
gcctatgttgatctgactaggcgagttcttggactagctgagtttcttgatgatagccgc
ttcaccaatctggagtcttcgttgattgctctaggcgcaaaagaatgcatttttccagct
gaatccggcaaatccaatgaatgcaaaagcctgtatgattccctggagaggtgtgccgtg
atgataacagagaggaagaaacacgagttcaaaggaagagatttagattcagatcttaag
agattggtgaaggggaatattgagcctgttagagatttggtatccgggtttgaccttgcg
actcctgctctaggtgcattactctcgttttctgaacttctctcaaatgaggataactat
gggaacttcacaatccgcagatatgatattggcggattcatgagacttgactctgcagct
atgagggctttgaatgtgatggagagcaaaactgatgctaataagaatttcagtttgttt
ggtctcatgaacagaacatgtaccgcagggatgggtaagagactgcttcatatgtggctg
aagcaacccctcgtggatttgaatgagattaagacgagattagatatagttcagtgcttt
gttgaagaagctgggttaaggcaggatcttagacagcatctgaagcgaatctcagatgtt
gagaggcttttgcgcagtctcgagagaagaagaggtgggttacagcacattattaaactc
tatcagtcaactataaggcttcccttcatcaaaacagctatgcaacagtacaccggagaa
ttcgcatcactcatcagcgagagatacctgaaaaagcttgaggctttatcagatcaagat
caccttggaaagttcatcgatttggttgagtgctctgtagatcttgaccagctagaaaat
ggagaatacatgatatcttcaagctacgacaccaaattggcatctctgaaagatcagaaa
gaattgctggagcagcagattcacgaattgcacaaaaagacagcgatagaacttgatctt
caggtcgacaaggctcttaaacttgacaaagcagcgcaatttgggcatgtcttcaggatc
acgaagaaggaagagccaaagatcaggaagaagctgacgacacagtttatagtgctggag
actcgcaaagacggagtgaagttcacaaacacaaagctaaaaaaactgggggaccagtac
caaagtgttgtggatgattataggagctgtcaaaaggagctcgttgatcgtgtagttgag
actgttaccagcttctctgaggtatttgaggacttagctgggttactttctgaaatggat
gttttgttaagctttgctgatttggctgccagttgccctactccatactgtaggccagaa
atcacctcttcggatgctggagatattgtactagaaggaagcagacatccatgtgtagaa
gctcaagattgggtgaatttcataccaaatgattgcagactcatgagagggaagagttgg
tttcaaatagtaacagggcctaacatgggagggaagtccactttcatccgccaggttggt
gtgattgtgctgatggctcaagttggttcctttgttccttgtgataaagcatcaatttcc
ataagagactgcatctttgcccgtgtaggagcaggcgattgccaactgcgtggagtgtca
acttttatgcaagaaatgcttgaaaccgcatcgatattgaaaggcgctagtgataagtca
ctgataattatcgatgaacttggtcgtggaacatcaacttatgatggttttggtttagct
tgggctatatgtgagcatctggttcaagtgaaaagagcaccaactctgtttgctactcac
ttccatgaacttactgccttggctcaagcaaactctgaggtctctggtaacactgttggt
gtggcaaacttccatgtcagcgctcacattgacactgaaagccgcaaactcaccatgctt
tacaaggttgaaccaggggcctgtgaccagagctttgggattcatgtggcggaatttgcc
aacttccctgaaagcgtcgtggccctcgcaagagagaaagctgcagagctggaagatttc
tctccctcctccatgataatcaacaatgaggagagtgggaagagaaagagcagagaagat
gatccagatgaagtatcaagaggggcagagcgagctcacaagtttctgaaagagtttgca
gcgataccacttgataaaatggagcttaaagattcacttcaacgggttcgtgagatgaaa
gatgagctagagaaagatgctgcagactgccactggctcaggcagtttctgtga
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