Arabidopsis thaliana (thale cress): AT3G49590
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Entry
AT3G49590 CDS
T00041
Symbol
ATG13
Name
(RefSeq) Autophagy-related protein 13
KO
K08331
autophagy-related protein 13
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
AT3G49590 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT3G49590 (ATG13)
03029 Mitochondrial biogenesis [BR:
ath03029
]
AT3G49590 (ATG13)
Membrane trafficking [BR:
ath04131
]
Autophagy
Autophagosome formation proteins
ULK complex
AT3G49590 (ATG13)
Atg1 complex
AT3G49590 (ATG13)
Mitochondrial biogenesis [BR:
ath03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
AT3G49590 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
824121
NCBI-ProteinID:
NP_190528
TAIR:
AT3G49590
UniProt:
Q9SCK0
LinkDB
All DBs
Position
3:18377409..18380369
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AA seq
603 aa
AA seq
DB search
MDFPENLPSDIGRLEQIVSHFFPKALHIVLNSRIPSLQSRGRTRERLSGLNVRKSDKWFN
LVMGDRPAALEKLHSWHRNILDSMIIDIILVHPISNDNLDDDDDHSDSVVRSAETVIERW
VVQYENPLIMSPQSSDSATRYQKVYKKSIILLRSLYAQTRLLPAYRVSRQLSSSLASSGY
DLIYKVSSFSDIFSGPVTETMKEFRFAPVEVPPGRLCASVTYRSDLSDFNLGAHITLPPR
IITDYVGSPATDPMRFFPSPGRSVEGHSFTGRAGRPPLTGSSAERPHSWTSGFHRPPAQF
ATPNQSFSPAQSHQLSPGLHDFHWSRTDAFGDNHQLSPPFSPSGSPSTPRYISGGNSPRI
NVRPGTAPVTIPSSATLNRYVSSNFSEPGRNPLPPFSPKSTRRSPSSQDSLPGIALYRSS
RSGESPSGLMNQYPTQKLSKDSKYDSGRFSGVLSSSDSPRFAFSRSPSRLSSQDDLDDPD
CSCPFDFDDVDESGLQYSHSLDRRKTSSSISQSLPLGRRSSQDAAVGVLVHMLKTAPPLR
QDSSTYMASMSGVQREGSVSGTESEFSMARSTSDALEELRNYKQLKDLLLSKSKSGSGPT
RVH
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggattttccagagaatttgccttcagatataggaagattagagcagattgtttctcat
ttcttcccaaaagcattacacatagttcttaattccagaatcccttcgttgcaatctcgt
ggtcgtactcgtgagcgtttatcaggtcttaacgttagaaaaagtgacaaatggtttaat
cttgtgatgggagatcgtcctgctgcgttggagaaattgcattcttggcataggaatatt
ctggattctatgattattgatatcattcttgtccatccgatttcaaacgataatttggat
gatgatgatgatcatagtgattctgttgttagatcagctgagactgtgattgagcgttgg
gttgttcaatatgagaatcctttgattatgtctcctcagagttctgactctgcaacgcgt
taccagaaggtttacaagaaatctatcattctgttgcggtctctttatgcacagactcgg
cttcttcctgcttatcgtgtctctaggcagctgagttcttctcttgcttcttctggttat
gatttgatttacaaggtttcatctttcagtgacatattctctggtcctgtgacggaaaca
atgaaagagtttcgttttgctcctgttgaagtgcctcctggtcgtctttgtgcatcggtt
acttaccgttctgacttatctgattttaatctcggtgctcatatcacattgcctccgagg
attataactgattatgtgggaagtcctgcaacagatcctatgaggtttttcccttctcca
gggagaagtgttgaaggccattcctttactggtagagctggtcggcctccattgactggt
tcatctgcagaacgtccgcatagctggactagcggctttcacagacctccagctcaattc
gcaacaccgaaccaatctttttcgccagctcagtctcatcagttgtcacctgggttacac
gatttccactggtcacgtacagatgcttttggtgacaatcaccagctttcacctcccttt
tcaccatcgggttctccatctactccaagatacatatctgggggtaacagtccgcgcatt
aatgtgagaccagggactgctccagtgaccattccttcttcagccacgttaaatagatac
gtttcatctaacttctctgagccaggtaggaatccacttcctcctttttcccccaaaagc
acaagacgctccccttcatcgcaggactctttgcctgggattgcgttgtacaggagttct
agaagcggagagtctccttctggattaatgaaccagtaccctactcaaaagctgtcaaag
gacagcaaatacgattcaggccgcttctcaggagttctgtcttcgagtgactcaccaaga
ttcgcgttttctaggagccccagtagattatcttcccaagacgacttggatgaccctgat
tgttcatgcccttttgatttcgatgatgttgatgagtcaggacttcagtacagccatagt
cttgaccggaggaaaacttcaagctctatatcgcagtcgctacctctagggagaagatca
tcacaggacgcagcggttggtgttctggttcacatgctgaagacagcaccaccattacga
caagactcaagcacttatatggcgtcaatgtctggggttcagagagaaggttcagtgtca
ggtacagaatctgaattttcgatggctcgtagcacatcagatgcactagaggaactgaga
aactacaaacagctcaaagacttgcttctctccaaatccaaaagtgggtctggaccaact
cgcgtccactga
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