KEGG   Arabidopsis thaliana (thale cress): AT5G62700Help
Entry
AT5G62700         CDS       T00041                                 

Gene name
TUB3
Definition
(RefSeq) tubulin beta chain 3
  KO
K07375  tubulin beta
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04145  Phagosome
Brite
KEGG Orthology (KO) [BR:ath00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    AT5G62700 (TUB3)
Chromosome and associated proteins [BR:ath03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     AT5G62700 (TUB3)
Cytoskeleton proteins [BR:ath04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    AT5G62700 (TUB3)
Exosome [BR:ath04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   AT5G62700 (TUB3)
  Exosomal proteins of colorectal cancer cells
   AT5G62700 (TUB3)
  Exosomal proteins of bladder cancer cells
   AT5G62700 (TUB3)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Tubulin Tubulin_C Tubulin_2 Misat_Tub_SegII Tubulin_3
Motif
Other DBs
NCBI-GeneID: 836391
NCBI-ProteinID: NP_568960
MIPS: AT5G62700.1
TAIR: AT5G62700
Araport: AT5G62700
UniProt: Q56YW9 Q9ASR0 A0A178UP81
LinkDB All DBs
Position
5
AA seq 450 aa AA seqDB search
MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV
PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMM
CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTG
LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATADEEGDYEDEEEGEYQQEEEY
NT seq 1353 nt NT seq  +upstreamnt  +downstreamnt
atgcgtgagattcttcacatccagggtggtcaatgcggtaaccagatcggagccaagttc
tgggaagtggtttgcgccgagcacggcatcgatccaaccggaaggtacaccggagactca
gatctgcaacttgagcgcatcaacgtttactacaatgaagcgagttgcggtagattcgtt
cctcgtgcagtgctcatggatttggagcctgggactatggatagtctcagatctggaccg
tacggtcagacctttcgacctgataacttcgtctttggtcaatccggtgcgggtaacaac
tgggccaagggacactacactgaaggagctgaactaatcgattccgttctcgatgttgtt
cgtaaggaagctgagaactgtgactgcctccaagggttccaggtttgtcactcattggga
ggaggaactggatctggtatgggaacattgttgatctctaagatccgtgaagagtaccca
gatcgcatgatgcttaccttctcggtgttcccttcaccaaaggtttctgatactgtggtg
gagccttacaacgctactttatctgttcatcagcttgttgagaatgctgatgagtgcatg
gttcttgataacgaggccttgtacgatatttgcttcaggactctcaaactcactaccccc
agctttggtgatttgaaccatttgatatctgccactatgtctggtgtgacttgctgtctg
aggttccctggtcaactcaactctgacctccgtaagcttgctgtgaatctcatcccattc
cctcgtcttcacttcttcatggttggttttgctcctctcacctcaagaggttcacagcag
taccgctccctcacagtccctgagctcacccagcaaatgtgggactccaagaacatgatg
tgtgctgcagacccaaggcacggacgctacctcacagcctctgccatgttccgtggcaag
atgagcacaaaggaagttgacgagcagatgctgaatgttcagaacaagaactcgtcctac
tttgtggagtggatccccaacaacgtgaaatcaacagtctgtgatatcccacctactggt
ctgaagatggcttccactttcattggaaactcaacatcgatccaagagatgttcaggcga
gtgagtgagcagttcacagctatgttcaggaggaaggctttcttgcattggtacacaggt
gagggaatggacgagatggagttcacagaagcagagagcaacatgaacgatcttgtgtca
gagtaccagcaataccaagatgcaacggctgatgaagaaggtgactacgaggatgaggaa
gaaggtgaataccaacaggaagaagagtactga

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