Anaerolinea thermophila: ANT_13120
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Entry
ANT_13120 CDS
T01410
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
atm
Anaerolinea thermophila
Pathway
atm03410
Base excision repair
atm03430
Mismatch repair
atm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ANT_13120 (recJ)
03430 Mismatch repair
ANT_13120 (recJ)
03440 Homologous recombination
ANT_13120 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atm03400
]
ANT_13120 (recJ)
DNA repair and recombination proteins [BR:
atm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ANT_13120 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ANT_13120 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ANT_13120 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BAJ63344
UniProt:
E8N4I0
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All DBs
Position
1473833..1475530
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AA seq
565 aa
AA seq
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MEPVQEKRWKIAPVVPSYLVEELKDYSPVTRQLLYNRGITSKIEAEHYLQADLPGYSPFL
LSGMTEVVDRLLYAVDHREKIAIYGDYDVDGVTATTLMVEVLQAYGADVQWYIPNRFDEG
YGLNADAVRELHERGVDVLLTVDCGIRSPGEARLAAQQGMDIIISDHHQPGSELPEAVGV
ICPKQAGNVYPYEHLSGVGLAFKIAEALLLRRPLVGVSAHNWLDLVALGTVADVVPLTGE
NRSLVRKGLEILKQSNREGILALARVAGLKLPSIESSHIGFILGPRLNAAGRVESAKAAV
ELLLARDLFQAGILAQQLDAQNRERQRLTQEVQERAIEIASAGKSDYLIMAFDPAFNPGV
VGLAASRLVELYYRPAIVGQSEEDAGQTRASCRSIPEFHITRALDQCAELLERHGGHQAA
AGFTVRNENLPVLQERLSSIAEQTLGNLDLIPSLHADMELPLSEIQPEVLWDLRRLQPTG
EGNPEAFFVSRGVQVKDARCVGARGEHLKLSLVDGRIVWDAIAFRQGHHIQNMPRFVDVL
YTLEQNTYNGNTTLQLRVRDLKPAQ
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggaacctgttcaggaaaaacgctggaaaattgccccggttgtgccttcctacctggtt
gaggaactcaaagattattctcccgtaacgcggcaattgttgtataaccgcggaattact
tcgaaaattgaagccgagcattaccttcaggcagatctccctgggtactcgccctttttg
ctctcgggaatgaccgaggtggtcgatcgcttgctgtatgcggtggatcaccgcgagaaa
attgctatttatggcgattatgacgtggatggggtaacggctactaccctgatggtggaa
gtcctgcaagcctatggtgcagatgtccagtggtacattcccaatcgttttgatgagggc
tacggcttaaacgccgacgcggttcgggaattgcacgaacgcggggtggatgtcctgctt
acggtggattgtggtatccgttcgccgggcgaagccaggctggctgcccaacagggcatg
gatatcatcattagtgatcatcaccagccgggtagcgaacttccagaagccgtgggggtg
atttgtccgaaacaggcgggaaatgtttatccgtatgaacatctttccggtgtaggactg
gcgttcaaaattgctgaagccttgttgttgcgtcgtcctcttgttggcgtatccgctcac
aactggttggatttggttgctcttggcacggtggcggatgtggttcctttgacaggtgaa
aaccgttctctggtgcgaaagggactggagattctcaaacaatccaatcgtgagggtatc
ctggcgctggcacgggttgctggtctcaaacttccttctattgagtcaagtcatattggt
ttcatccttggaccgcgtttgaacgctgctggcagggtagagtcggcaaaggcagccgtt
gaattgttgctggcaagagatcttttccaggcagggattctggctcagcaactggacgca
cagaatcgtgagcgccagcgtttgacccaggaagtacaggagagagccattgagattgcc
agcgcgggtaagagcgattatctgatcatggcatttgatcctgctttcaatcccggagtg
gttgggctagccgcgtccaggctggttgaactgtactatcgcccagccattgtggggcaa
agcgaagaagatgccggtcaaacacgcgcatcctgtcgctctatccctgaatttcacatt
acccgggcgctggatcaatgtgcagagttgctggagcgacatggtggacatcaagctgcg
gcagggtttactgtgagaaacgaaaacctccctgttcttcaagaacgtttatcctccatt
gcagagcagactttaggtaatctcgacttaatcccctcgctgcatgcggatatggaactc
cccctttcggagattcaacctgaggttttatgggatcttcggcgcctgcaacctaccggg
gagggcaatcctgaagccttttttgtctctcgaggggttcaggtgaaagatgcacgctgt
gttggtgctcgtggtgaacatttgaaactttctctggtggatgggcggattgtctgggat
gctattgcgtttcgtcagggacaccatattcagaacatgccgcggtttgtggatgttctg
tataccctggagcaaaatacctataacggaaatactactctacaactcagggtaagagat
ttgaaacccgcccagtga
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