Actinomarinicola tropica: GH723_01820
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Entry
GH723_01820 CDS
T06914
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
atq
Actinomarinicola tropica
Pathway
atq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
atq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GH723_01820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atq03400
]
GH723_01820
Enzymes [BR:
atq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GH723_01820
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GH723_01820
DNA repair and recombination proteins [BR:
atq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GH723_01820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Ribosomal_S13
NFACT_N
zf-TFIIB
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
QGG93941
UniProt:
A0A5Q2RHC4
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All DBs
Position
complement(354616..355452)
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AA seq
278 aa
AA seq
DB search
MPELPEVQAHAERLTDSFADAVLSRFEPLSFTVLRTYAPDPKDAVGRPLQEVGRRGKLLL
LRFAPLTFVVHPMQGGRLKPDPKQSAKPRGGIARWRFEDGGALLLTEPGTERKAGVWVLD
GDPLVQEPLADLGPEADTITRDDLATRLAATSMRVHGFLRDQQQLAGVGRRLANEVLHRA
QLSPFATTSKLDGDEVDRLHAALGALIAESLEFERAQSEMVKSADRPGAVHNRVGQPCPV
CDDAIRAVEYRAYTVAYCPTCQTGGKVLADNTTSKFLK
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctccccgaggtccaggcccacgccgaacggctgaccgacagcttcgccgac
gccgtcctctcacgcttcgagccgttgtcgttcacggtcctgcgcacctacgccccggat
ccgaaggacgcggtcggccgaccgctccaggaggtcggccggcggggcaagctcctcctc
ctccgcttcgccccgctcacgttcgtcgtccacccgatgcagggcggccgcctgaagccc
gaccccaagcagtccgccaagccgcggggcggcatcgcccgctggcggttcgaggacggc
ggtgccctgctgctcaccgagcccggcaccgagcgcaaggccggcgtctgggtcctcgac
ggcgacccgctcgtccaggagccgctcgccgacctcggccccgaggccgacacgatcacc
cgcgacgacctcgcgacccggctcgccgccacctcgatgcgcgtccacggcttcctgcgc
gaccagcagcagctcgccggcgtcggtcgccgcctcgccaacgaggtcctccaccgcgcc
cagctgtccccgttcgcgaccacgtcgaagctcgacggcgacgaggtcgaccggctccac
gccgccctgggcgcgctgatcgccgagtcgctcgagttcgagcgagcccagagcgagatg
gtgaagtcagcggaccgtcccggcgccgtgcacaaccgggtcggccagccgtgcccggtc
tgcgacgacgcgatccgcgccgtcgagtaccgggcctacaccgtggcctactgcccgacg
tgccagaccggcggcaaggtcctcgccgacaacacgacgagcaagttcctcaagtag
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