Amborella trichopoda: 18423195
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Entry
18423195 CDS
T02990
Name
(RefSeq) partner of Y14 and mago
KO
K14294
partner of Y14 and mago
Organism
atr
Amborella trichopoda
Pathway
atr03013
Nucleocytoplasmic transport
atr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
18423195
03015 mRNA surveillance pathway
18423195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atr03019
]
18423195
Messenger RNA biogenesis [BR:
atr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
18423195
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mago-bind
SRP-alpha_N
Motif
Other DBs
NCBI-GeneID:
18423195
NCBI-ProteinID:
XP_006827860
UniProt:
W1NIJ8
LinkDB
All DBs
Position
Unknown
AA seq
226 aa
AA seq
DB search
MANTEEQLALFGKTLKEGERVLAPTRRPDGTLRKPIRIRAGYVPQEEVAIYQSKGALWKK
GLPEVPPGYDPELNAMPKTKSAKRNERKKEKRLQAALSLQNSDKGKSTLDSNAAKEEIPY
SNEPGSRINEVESAAHHMNALSLSTTSVTVGPTPDPTETPNTGATGQDIDKRIRSLKKKI
RLAEGLPQAGDEKANLKPEQLEKLAKIEGWREELKALEGKKATLVS
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggccaacacagaggagcagctcgccctttttggaaaaaccctaaaagaaggagaaagg
gttctcgctcccacaagaagaccagatggaactcttcgaaaacctataagaattagggct
ggctatgttccccaagaagaagttgccatttaccagtcgaaaggagctctgtggaaaaag
ggtttgccggaggtaccaccaggttatgatccagaactgaatgccatgcccaagaccaag
tcggccaagaggaacgagcgtaagaaggagaagaggttgcaggcagctctttctttgcaa
aactctgacaagggaaagtccacactggactctaatgcagcaaaagaggagataccttat
tctaatgagccaggaagtcgaatcaatgaggtggaatctgcagctcaccacatgaatgca
ttgtccctttctacaacctctgttacagtgggtccaacaccagacccaactgagacccct
aatacaggagccactggtcaagatattgataaaagaatccgttctttgaaaaagaagatt
cgactcgcagaggggcttccacaggctggtgatgagaaagccaatctgaaaccagaacaa
ttggagaagctcgcaaaaattgagggatggcgtgaggagcttaaggctctggagggtaag
aaagccacattggtttcatga
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