Amborella trichopoda: 18426509
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Entry
18426509 CDS
T02990
Name
(RefSeq) ABC transporter F family member 1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
atr
Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atr03009
]
18426509
Ribosome biogenesis [BR:
atr03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
18426509
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_23
AAA_14
RsgA_GTPase
AAA_16
AAA_28
MMR_HSR1
AAA
AAA_18
AAA_33
AAA_30
AAA_15
AAA_22
VapE-like_dom
Ploopntkinase3
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
18426509
NCBI-ProteinID:
XP_006833217
UniProt:
W1NTJ1
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MVSDASKKKAAAKKAAAAAKRGGKSGAGASKAAEAQNGVDKLANGVGGIHLSDRTCTGVL
CSHPLSRDIHIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLAAIGCRELP
IPEHMDIFHLTREIEASDLSALEAVVSCDEERLRLEKEVETLAAQDDGGGEALDRIYERL
EAMDASTAEKRAAEILYGLGFSKQMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPT
NHLDLEACVWLEETLKNFDRILVVVSHSQDFLNGVCTNIIHMQNKKLKLYTGNYDQYVQT
RQELEENQMKQYRWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVV
RDKVLVFRFTDVGKLPPPVLQFVEIAFWYTPENIIYKKLDFGVDLDSRIALVGPNGAGKS
TLLKLMAGDLEPKDGMVRRHNHLRIAQYHQHLAEKLDLEMSALQYMMKEYTGNEEEKMRA
AIGKFGLTGKAQVMPMNNLSDGQRSRVIFAWLAWRQPHLLLLDEPTNHLDIETIDSLAEA
LNEWDGGMVLVSHDFRLINQVAKEIWVCENQVVTRWEGDIMDFKNHLKAKAEL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccgatgctagcaagaagaaggcagctgccaagaaggctgctgctgccgcgaag
cgaggaggtaagtctggggctggggcatcaaaggctgccgaggctcagaatggagttgat
aagttggccaatggagttggtgggattcatttatctgatcgcacttgcactggagttctt
tgttcacaccccctatcccgagatatccatatagaatccttatctgttaccttccacggc
cacgatctcatagttgattccgaattggagctcaattatggaaggcgctatggtttgctt
gggctgaatggctgtggaaagtccactcttttggcagctataggatgcagagaactccca
attccagaacacatggatatctttcaccttacaagggagatcgaggcttctgatttgtcg
gcattagaagcggttgtcagctgtgatgaagaaagactgagattggagaaagaagtcgag
acactagctgcacaggatgatggtggtggagaggctcttgatcgtatttatgagcgtcta
gaggcaatggatgcatcgacggctgagaagcgtgcagcagagatcttgtatggtctgggc
ttctctaaacagatgcaggccaagaagactagagatttctctggtgggtggcgtatgaga
atcgcgttggcaagagctttgttcatgaatcccaccattctattactagacgaacccaca
aatcatcttgatctagaagcatgtgtttggttggaggagacactaaagaactttgatcgc
atcctggtggtggtctcccactcacaggacttcctcaatggggtgtgcaccaacatcatc
cacatgcagaacaagaagctgaagctctacactggtaactacgatcaatacgttcaaacg
cgccaagagctcgaggagaaccagatgaagcaatacaggtgggagcaggagcagattgcc
tccatgaaagagtacattgctcgttttggtcatggttctgcaaagctcgcacgccaagct
caaagcaaggagaaaacccttgcgaaaatggagcgtggtggtctcactgagaaggtggtg
agggataaagtcttggtctttcgcttcactgatgtgggtaagctcccccctcctgtttta
cagttcgttgaaattgccttttggtacaccccggaaaacatcatatacaagaagctggat
ttcggggttgacctagactcgaggatcgctttggtgggtcctaatggggcagggaagagc
acactattgaagctaatggctggggatctagagcccaaggatgggatggtgaggaggcat
aaccatttgagaattgctcaataccatcagcacttggctgagaagctcgaccttgaaatg
tccgctttgcagtacatgatgaaggaatacacgggcaatgaggaggagaagatgagggca
gccattggaaaattcgggcttactggaaaagctcaggtgatgcctatgaataacttatca
gatgggcaaaggagccgagtcattttcgcatggttagcttggaggcagccacacctattg
ttgctcgatgaaccaactaaccatttggatattgaaaccattgattcgcttgctgaagcc
ctcaatgagtgggatggggggatggtgctcgttagtcacgatttccgtctcatcaaccag
gtggccaaggagatttgggtgtgtgagaaccaagtggttacaaggtgggagggtgatatc
atggacttcaagaaccatctcaaggcgaaagcggagttatga
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