Amborella trichopoda: 18430296
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Entry
18430296 CDS
T02990
Name
(RefSeq) isoleucine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
atr
Amborella trichopoda
Pathway
atr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
18430296
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
atr01007
]
18430296
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atr03016
]
18430296
Enzymes [BR:
atr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
18430296
Amino acid related enzymes [BR:
atr01007
]
Aminoacyl-tRNA synthetase
Class I (U)
18430296
Transfer RNA biogenesis [BR:
atr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
18430296
Prokaryotic type
Other AARSs
18430296
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
zf-FPG_IleRS
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
18430296
NCBI-ProteinID:
XP_011621916
LinkDB
All DBs
Position
Unknown
AA seq
1089 aa
AA seq
DB search
MDSFSLLKSATNPVIMAVHASSCRAISQRTFSTFRCANVLTILPTSRRSFKKNFIFLKDK
SLSTCSSEDFGYTSKRRARGPVMAAKKLSEGAQKEDGKYKHTVDLPKTSFGLRANAVMRE
PEIQKLWEDNEVLKRVVDRNNRGSFVLHDGPPYANGDLHIGHALNKILKDIVNRYKLLQG
YKVHSVPGWDCHGLPIELKVLQSLDQDARKELTPIKLRKKATKFAKDTVDVQRKSFKRYG
VWGDWSNPYLTLTPEYEAAQIEVFGQMAMKGYIYRGLKPVHWSPSSCTALAEAELEYPDG
HISKSIYAIFKVVHVPENAYGLFGDFLPNLSLVIWTTTPWTIPGNVAVSVNAELLYAVIE
VTSLTEGGSTSQGSSKLGKIMRCGKKVPYLIVATERVPALQSMWNAKIEVKKTFRGSELE
NCRYVHPVDGRENPVVLGGDYITAESGTGLVHTAPGHGPEDYATGLKYGLPVLSPVDDNG
IFTEEAGRFSGLDVLGEGTVAIANYLDDQMSILLEESYEHKYPYDWRTKKPTIFRATEQW
FASVEGFRQATMDAINQITWIPEQGKNRIAAMASTRADWCISRQRSWGVPIPCFYHVQSR
EPLMNKETIDHIKSIILEKGSDAWWYMTTEELLPEAYHKVAADYQKGTDTMDVWFDSGSS
WAAVLEKRDGLNCPADLYLEGSDQHRGWFQSSLLTCIATRGKAPYRSVLTHGFVLDEKGL
KMSKSMGNVVDPRTVIEGGKNPKDAPGYGADALRLWVSSVDYSGDVLIGSQILRQMSDIY
RKLRGTLRYLLANLHDWKPEASVGYSELPMIDKHALFHLGTVVNSIKDHYETYQFCKIFQ
IVQRFAIVDLSNFYFDVAKDRLYVGGTTSLNRRSCQTVLAAHLLCIVRVIAPILPHLAED
VWQHLPFQHMLQDGSIAEFVFESRWPDLNKQWLGIPAEEVDYWGKLLELRGEVNKVLETA
RVAKAIGSSLDAKVYFYTSHEGMASKLYNMCFASCDADRLHRIFITSQAEVLSSLDDDII
ANIPYTGEFDFEGKHKIWIGVSRAGGEKCERCWNYTPQVGSFMDHPTLCWRCYHAVVGSQ
PLAAVAGAH
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggattctttctctctcctaaaatctgctacaaacccagtaatcatggccgtccatgca
tcctcatgccgggccatttcgcaacgaacgttttcaacttttaggtgtgctaatgttttg
actattctacctacttcaaggaggtctttcaagaaaaactttatttttcttaaggacaag
tctctctctacttgttcaagtgaagattttggttatacttcaaagcgaagagctcgtgga
cctgtcatggctgccaaaaaattatcagaaggtgcacagaaagaggatggaaaatacaag
cacacggtggatttaccaaagacttcatttggtttgagagcaaatgctgtgatgagagag
ccagaaatacaaaagttgtgggaggataatgaggtcttgaagagggttgttgatagaaat
aacagggggagttttgttcttcatgatggtcctccttatgccaatggtgatttgcatatt
ggccatgctttgaacaagattctaaaagacattgttaatcgctacaagcttcttcaaggt
tacaaagtccattctgtgccggggtgggattgccacggtctacctattgagcttaaagtt
cttcagtcattggatcaagatgccaggaaggagctaacaccaataaaattgagaaagaaa
gctaccaagtttgctaaagacactgttgatgttcaacgtaaatctttcaagcgttatggg
gtatggggtgattggtccaatccttatctaacgcttactccggaatatgaagctgcccag
attgaagtatttggccagatggctatgaagggatacatttataggggcctgaaacctgtt
cactggagtccatcctcatgtactgcccttgcagaggcagagttggagtatccagatggg
cacatttccaagagcatatatgccattttcaaagtggtccatgtgcctgaaaatgcatat
ggcttgtttggtgattttttaccaaatttgtccttggtgatatggactacaactccctgg
accatcccaggaaatgttgctgtttcagtgaatgctgaacttctctatgcggtcattgaa
gttacctctctcacagaaggagggtctacatcacaagggagcagcaaactgggaaaaatt
atgagatgtggaaagaaggtgccttatctcattgtagcgacagagcgtgtaccggcacta
cagtcaatgtggaatgcaaaaattgaagtcaagaagaccttccgcggttcagaactagaa
aactgcaggtatgttcatccagtggatggcagggaaaaccctgttgttcttggtggagat
tatattaccgctgagtcaggaaccggacttgtccatactgctcctggtcatggtccagaa
gattatgcaactggcttgaaatatggattgcctgtactttctcctgtggatgacaatgga
atattcactgaagaagctggtcggtttagtggcctagatgttttaggagaaggaacagtt
gctattgcaaattacttagatgatcaaatgtcaatccttttagaagaatcatatgaacac
aagtatccttacgactggagaacaaagaaacctactatatttcgggcgactgagcaatgg
tttgcttctgtagaaggttttaggcaagcgactatggatgccatcaaccaaataacatgg
attccagaacaggggaaaaatagaattgctgcaatggcatccacgcgggctgattggtgt
atttcacggcaaagatcatggggtgtgcctattccttgtttctatcatgtacaatcgagg
gaaccactgatgaataaagaaaccattgaccatattaagtctatcatattggaaaagggt
agtgatgcttggtggtacatgactacagaggaactacttccagaggcatatcacaaagtg
gctgctgattaccaaaaaggaacagatacaatggatgtttggtttgactctgggtcctcg
tgggctgctgtgttggagaaacgagatggccttaactgccctgcagatttgtatcttgaa
ggatcagatcagcatcgaggatggtttcaaagttcattgttaacctgtattgctactaga
ggaaaggctccctaccgaagtgttttaacacatggttttgtactagatgagaagggtctt
aagatgagtaaatccatggggaatgttgtggacccgagaactgttatcgaaggagggaag
aatcccaaggatgcacctggatatggagcagatgccttgcgcctttgggtatcaagtgta
gattattctggtgacgtgttgatagggtctcaaattcttcgtcagatgtcagatatatat
agaaagcttcgaggaactttgcgatatctcttggctaatctgcatgattggaaacctgag
gcttctgttggttatagtgaacttccaatgattgacaagcatgcattattccatctggga
actgtggtaaacagcatcaaagaccactatgaaacttatcagttctgcaagattttccag
attgtgcaacgcttcgcaattgtagatttatcaaatttctactttgacgttgccaaagat
agactttacgttgggggtacaacaagtctaaaccgaagaagttgtcaaaccgtccttgca
gcacatctcctctgtattgttagggtgattgctccaatattaccacatttggctgaagat
gtatggcaacacctgccttttcagcatatgttgcaagatggttccattgccgaatttgtt
tttgagtcacgttggccggatcttaataaacagtggctgggtataccagctgaggaggtt
gattactggggaaaattacttgagttaagaggagaggtgaataaagttttggagactgct
cgtgttgcaaaggcaataggatcaagcttagatgcaaaggtttatttttatacatcccat
gaaggcatggcgtcgaaattgtataatatgtgctttgctagctgtgacgcagataggttg
catcggatatttataacatcccaggctgaagttctgtcctcattagatgatgacataatt
gccaatattccttacacgggagagtttgattttgaagggaagcacaaaatttggattggc
gtatcacgtgcaggaggagaaaaatgtgagaggtgctggaattacactccacaggtcggt
tcatttatggatcatcctacgctttgttggcgctgttatcatgctgtggttggatcccaa
cctcttgctgctgttgctggtgcccattaa
DBGET
integrated database retrieval system
