KEGG   Amborella trichopoda: 18435385
Entry
18435385          CDS       T02990                                 
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein SEC16A homolog
  KO
K20353  COPII coat assembly protein SEC16
Organism
atr  Amborella trichopoda
Brite
KEGG Orthology (KO) [BR:atr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:atr04131]
    18435385
Membrane trafficking [BR:atr04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    18435385
SSDB
Motif
Pfam: Sec16_C Sec16
Other DBs
NCBI-GeneID: 18435385
NCBI-ProteinID: XP_020523770
LinkDB
Position
Unknown
AA seq 1619 aa
MASPPFEVEDQTDEDFFDKLVNDDDDGITSSSFKKTILVGSSQDMTEVLDANDTESELPD
KAFSKLSLEDMGTSGETHEDLRDCVDKAPDDPVKDVLVAEESVSLRSFDSFVFNTVVERS
DSVTPLLGFDINGSAIPKVAPHLGFEVNGGLDPNATPYSRRETIGGVDHNKSESRRGSDV
TQTCVKEVQWSSFYAVSTQTDAGGFGSYSDFYSELEGDLADPNGGSGNSNIPAYFEPKND
PTLNRNQAPVTTFSSTTYQDDPASMSKAQSSFYRNNPVTFVSSTELRQEGTKTEEDGWNS
SGNSNDQSYGVNTSNTTDGWQDVYSIQHYESLYPGWKYDWTNKMWYQVDSHYESASSSFA
AKTLNQEGCIGQVYPSTGDGASISNQGSMNSSVTSFSNQSSESVVGTNNPSQGGSGYPSH
MYFDPQCPGWYFDMLANEWRSLDSYVQTTQSDTTQGDPKSGNQQAQDAKGSLINPIATEA
PVIAAKTLNQESCIRQGYPSAGDGASISNQGSMNSSGMPLLNQSSESVVGTNNPSQGDSG
YPNHMYFDPQCPGWYFDMLTNEWRSLDSYVQTTQSDTTQIDPKSGNQQAQDANVSLINAI
ATEAPVISEHGQTDGWTGYLSSHSHAKDQVHTSFPQQNVSYPGQTSTGQCGDSQYLGQSN
LYNSAWHDRSHGEQQMGFGNTATVPSYVPANYSHTNAKSQNFVTAETAYQFENMMADQQL
QTQVSSDFYGNQKAVDYSPPSIPNVSSNYTQFSYGMAGGRTTTGRPHHALVTFAFGGKLV
VMKPNNSFSSSAAIGSQDPAGGSISIINLMDIVVDKNDIMKDGSGASSYFHALCQQSFPG
PLVGGSASSRDVYKLIDERIANCAVSSADFREGGHLRLLLSLLKICCQHYGKLRSPFAAD
SATQEVDGPESAVTKLFASTRNTGLHMSEYGACTQCLQSLPSEAQSRATAIEMQNLLIAG
RKKEALQCGQEGQLWGPALVLAQQLGEEFYADTVKQMALRQFVPGSPLWMLTLFIFXAIL
LTVTTHVQWLXASLNGMLDDWKENVAIIAGNRIQGDQSVLVHLGDCLWRERDEVIAAQAC
YLVAELNIEPFSDTARLCLIGADHLKCPRTYASPEAIQRTEVYEYTKVQGNAQYILLPFQ
PYKVIYAHMLAEVGKVSDSLRYCQALSKSMKNAVRAPEAELWKSMISSLEERIRTHQQGG
YSSNLAPAKLVGKLFTTIDRSIHRMIGAPPPPLPPLPGNALSSEPDNHLGISNVVNNSSR
MSSGSLMPSASMDPISEWTGDNNKFTVQSRSISEPDFGSSLIQKDAASQKHSESKALASG
GGNRFGRFGSSILQKAVGLVSRNRQAKLGEKNKFYYDEKLKRWVEEGAEPPPAEAVLAPP
PTMASFQNGTPDYNPNSTVDKEVSPSNGVQGIKSPIPSGHTSGMPPIPPSTNQFSSRGRM
GVRSRYVDTFNKGGGTSQSPSFQSPAAQIAKKPSTPSKFFVPTQATPSESIIQNDAGTTS
ENMIGTNGEDPSISGMHTSLPPIPSSSSMPRFASLDNVTSISSKGTMGLGKEMESLNSLS
RAASWSGGFPQMIGHKPLNLAGGPSLSSSHSNSSLMNAVDTAYFPNSSGSFSDLQEVEL
NT seq 4860 nt   +upstreamnt  +downstreamnt
atggcatctcctccatttgaagtggaggatcaaacagacgaggatttctttgacaaactt
gtcaatgatgatgatgatggaataaccagttcgtcttttaagaaaactattttagttggt
tctagtcaggatatgacagaagttcttgatgctaatgataccgaaagtgagctacccgac
aaagcattctcaaagttaagtcttgaggatatgggaactagtggagaaacccacgaagac
ttaagagactgtgttgataaagcaccagatgaccctgtaaaggatgtattggttgctgag
gaaagcgtctctttgagatcctttgattcatttgtcttcaacacagttgtggaaagaagc
gattcagtcacacccttattggggtttgacattaatggtagcgctattcctaaggtcgca
ccccatttaggctttgaagttaatggtggccttgatcccaatgccacaccatattcaagg
cgtgagaccattggtggggttgatcataataagtcagaatctagaagagggagtgatgtt
acccagacatgtgtgaaggaggtacagtggagtagtttttatgctgtgtctactcagact
gatgctggtgggtttggttcctactctgacttctacagtgaattggaaggtgatttagct
gatcctaatggaggttcaggaaatagcaatataccagcatactttgaacccaaaaatgac
cctacccttaataggaatcaggcccctgttactacgtttagttccactacatatcaagat
gatcctgcgtcaatgagcaaggcccaatcttctttctatagaaacaatccggttactttt
gtctcctcaactgaattgcgacaagaaggaactaaaacagaggaagatggatggaattcc
tctggcaatagcaacgatcaatcctatggtgtaaatactagtaatacaactgatgggtgg
caagatgtgtacagtattcaacactacgaaagtctttaccctggttggaagtatgactgg
acaaacaagatgtggtatcaggtggacagccactatgagtcggcgtcaagttcttttgca
gccaaaacacttaaccaagaaggctgtatcgggcaggtgtatccaagcaccggtgatggt
gctagcatatctaaccagggatctatgaatagttcagtgacatctttctcgaatcaatca
tctgaatcagttgtgggaaccaacaatccttcacaaggtggttcgggttacccgagtcat
atgtattttgacccccaatgtcctggctggtactttgatatgcttgccaatgaatggcgc
agtttggattcgtatgttcagacaactcaatctgatacgacacaaggagacccaaaatct
ggaaaccagcaagcccaggatgcaaagggttcattgattaatcccattgccaccgaagct
cctgttattgcagccaaaacacttaaccaagaaagctgtatcaggcaggggtatccaagc
gctggtgatggtgctagcatatctaaccagggatctatgaatagttcagggatgcctttg
ttgaatcagtcatctgaatcagttgtgggaaccaacaatccttctcaaggtgattcaggt
tacccgaatcatatgtattttgacccccaatgtcccggctggtactttgacatgcttacc
aacgaatggcgcagtttggattcgtatgttcagacaactcaatctgatacaacacaaata
gacccaaaatctggaaaccagcaagcccaggatgcaaatgtttcattgattaatgccatt
gccactgaagctcctgttattagtgaacatggtcaaactgatggatggactggatatttg
agtagtcattctcatgctaaagaccaggtccataccagttttccacagcagaatgtgtcg
tatcctggccagacttctacaggccaatgtggggattcccaataccttggtcaaagtaat
ttgtataattcagcatggcatgatagaagtcatggagaacaacaaatgggttttgggaac
acagcaacggtgccttcttatgttcccgcaaattacagtcacaccaatgcaaagtcacaa
aactttgtcactgcagaaactgcttatcagtttgagaatatgatggcagatcagcagttg
caaacacaagtcagcagtgatttctatggaaatcagaaagcagtggattattctcctcca
tcgattcctaatgtgagttcaaattatacacaattctcatatggtatggcaggaggaaga
acaaccacaggacgccctcatcatgctttggttacttttgcttttggaggaaagcttgtg
gttatgaagccaaataattctttcagttctagtgctgccattggaagtcaggacccagcg
ggaggctccatttcaattattaatttgatggacattgtggtggacaagaatgacatcatg
aaggatgggagtggtgcaagcagttacttccatgccttgtgccaacaatctttccccggc
ccacttgtcggtggcagtgcttctagtagggatgtgtataaattgatagatgagaggatt
gcaaattgtgcagtttcctcggctgattttagggagggagggcatttgaggctgctttta
tccttgttgaaaatttgttgtcaacattatggaaagctgcggtctccttttgctgctgac
tcagcaactcaggaagttgatggacctgagtcagctgtgacaaaactttttgcctctact
agaaacactggcctccatatgagtgagtatggtgcctgcacacagtgtttgcaaagcttg
ccttcagaggcacaaagtcgggccactgctattgagatgcaaaatcttctcattgctggt
agaaaaaaggaagctcttcaatgtggacaagaaggtcagttatggggccctgctcttgtt
cttgctcaacagcttggtgaagagttctatgccgatactgtgaaacaaatggcgcttcgt
cagtttgtaccaggatcacccttgtggatgttaactttgtttatattttgagccatctta
ttgacagtgacaactcatgttcaatggttataggcctcattgaatggaatgttggatgat
tggaaagagaatgtggccatcatagctggaaatagaatacagggtgatcagtctgtcctt
gtacaccttggggactgcctgtggagagagagggatgaggttattgctgcgcaagcctgt
tatttggtagctgaattaaacatagagcctttctctgacactgcaagactatgccttatt
ggtgcagaccacttgaaatgtcctcgaacatatgcttctcctgaggctattcagagaaca
gaggtgtatgaatacacgaaggtgcaaggcaatgcccagtatattttactgccatttcaa
ccttataaggtcatctatgcacacatgctggctgaagttggcaaggtttcagactctttg
aggtactgtcaagctttatccaagtcaatgaaaaatgctgttcgtgctcctgaagctgaa
ttgtggaagtctatgatatcatccttggaggaacgtatacgaactcatcaacagggagga
tacagctccaatttggcccctgccaaattagtgggtaagttatttaccactattgataga
tccattcaccgcatgatcggtgcaccaccaccacctttaccaccactgccgggtaatgca
cttagcagtgagcccgataaccatttagggatttcaaacgttgttaacaattcttcaaga
atgagcagtggatcactgatgccatcggcttcaatggaccccatcagtgaatggacaggg
gacaacaataaatttacagtgcaaagcagaagcatttcagagccagattttggtagcagc
ttgatacagaaagatgctgcctctcaaaaacattctgagtccaaagcattggcctctggt
ggaggaaatcgttttggccggtttggatcaagcattcttcagaaggctgtgggattggtc
tcaagaaaccgtcaggccaagctgggggagaaaaacaagttctattatgatgaaaagctt
aagagatgggtagaagaaggtgctgagccaccacctgcagaagctgtcttggcacctcca
ccaaccatggcaagttttcagaatggcacgcctgattacaatccaaacagcacagtcgac
aaggaggtatcaccctccaatggcgtacagggtatcaaatcacccattccctcaggacac
acttctggaatgcctccaattcctcctagcacaaatcaattctcttctcgtgggcgtatg
ggcgttcgatccaggtatgtcgatacgttcaacaaaggtgggggtacttcgcaatcccct
tctttccaatcacctgctgcccaaattgcaaaaaagccaagcaccccctcgaaattcttt
gtcccaacccaggccaccccaagtgaaagtatcattcagaacgatgcaggaactacaagt
gaaaacatgatcggtacgaatggagaagacccttctatatcaggcatgcatacatcacta
ccaccaataccttcatcatcatccatgccaagattcgctagcttggataatgtaacctcc
atttcgagtaaaggaacaatggggttgggaaaagagatggagtcccttaactccctgtcc
cgagctgcctcatggagtggaggcttcccccagatgatcggacacaagccactaaatttg
gcgggaggccccagtttatcatcttctcactccaattcttctttgatgaatgctgtagac
actgcctactttcctaatagtagtggaagtttcagtgacttacaagaagtggagctgtga

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