Amborella trichopoda: 18440024
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Entry
18440024 CDS
T02990
Name
(RefSeq) asparagine--tRNA ligase, cytoplasmic 1 isoform X3
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
atr
Amborella trichopoda
Pathway
atr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
18440024
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
atr01007
]
18440024
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atr03016
]
18440024
Enzymes [BR:
atr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
18440024
Amino acid related enzymes [BR:
atr01007
]
Aminoacyl-tRNA synthetase
Class II (A)
18440024
Transfer RNA biogenesis [BR:
atr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
18440024
Prokaryotic type
18440024
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
Flu_NS2
Motif
Other DBs
NCBI-GeneID:
18440024
NCBI-ProteinID:
XP_006850236
UniProt:
W1PP82
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MASEQGVVNQQGLLTLTPSGRTIETGEVPNVPKVDWSKYSKRVVLRSILGRSDGGLGLVG
SRVVIGGWVKSGREAHVGWLKTAPDPSPAPPSPFKDLTCVQNIQQSIPNCLRSILRLDVG
GNIPLAFNNVNGVGSKQDSVVPTKSVPRVAQLQVNDGSCASSLQVVVEASITPPGQVIPI
GTSILAEGVLRQSSTSSKRSIELKVEKIFHVGTVDSTKYPITKTKLPLDFLRSYSHIRPR
TNTIASVTRIRNSLAYATHTFFQNHGFLYVHTPIITTSNARGTCEMFQVTNLFSEADRIE
ELEVVRQHEEANLKVARAAIKEKSDRIEELKRSNSNKEAWYAAEQDLKKTKQLASQMEER
LKSESGTAYKLYKIDFSRDFFSRQAYLTVSGQLHLESYACALGNVYTFGPTFRAEKSEST
RHLAEFWMVEPEMAFAELEDAMNCAEDYVKFLCQWLIDNCLEDMKLMSKLIDKNIFDRLR
LVASSSFERITYTKAVELLKVAEKPFQSNIEWGVCLTEEHERYLSDDVYKRPIIICNHPK
DIKPFYVRLNDDRRTVAAIDVIVPKVGALIRGSQREERFDIMDKRIQELGFPRDPYEWYL
DLRKHGTVKHSGFSLGFEQMVLFATGLANVRDSIPFPRFCGKLGMDGAGDKRFSIRTVCL
PNVCK
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagaacaaggggtggttaatcaacagggcctcctaaccctaacaccatctggt
cgtactattgaaactggtgaagttcctaatgtgcccaaagtcgattggtccaagtactca
aaacgggtagttttgaggtcaattcttggtcgcagtgatggagggctaggtttagttggg
tcgagagtcgtgatcgggggttgggtgaaatccggtagagaagcacatgttgggtggctt
aaaactgctcctgatccttctcctgctcctccttcccccttcaaagacctaacttgtgtt
cagaacattcagcaaagcatacccaactgtttgcgttctatccttaggcttgacgtggga
ggtaatatccctcttgcctttaataatgttaatggcgttggatcgaaacaagatagtgtt
gtgccaacaaaaagtgtcccacgtgttgctcagttgcaagtaaatgatggttcttgtgct
tcaagtctccaggtggtggttgaagcttccataacaccacccggccaagttatacccatt
ggaacatctattttagccgaaggtgtgctaaggcagtcatctacttcttcaaagcgcagt
atagagcttaaagtggagaaaattttccatgttgggactgttgattctaccaagtatcca
ataacaaagactaaattgcccttagatttcctaaggagttattcacacatccggccccga
acgaatacgattgcctctgttactcgaatacgcaattctctcgcttatgcaacccataca
ttctttcagaatcatgggttcctatatgtgcacactcccattatcactactagtaatgct
agaggcacttgtgagatgtttcaagttacaaatttattcagtgaagcagatagaattgag
gagctagaagtagtgagacaacatgaggaggctaatcttaaagttgcaagggctgccatc
aaggagaagagtgataggattgaggagttaaaaagaagtaacagcaataaggaagcatgg
tatgctgcagaacaagatctcaaaaagacaaaacagttggcatcacaaatggaagaacgt
ctcaagtcagaatctggaactgcatataaactttataagattgacttttctagagatttc
ttttctcgtcaggcatatttaactgtatctggtcagcttcatctggagagctatgcatgc
gccctcggaaatgtttatacatttgggcctacttttcgtgctgaaaaatctgaatctacg
aggcatttagctgagttttggatggtagagccagaaatggcttttgcagaattagaggat
gccatgaactgtgcggaagactacgtgaagtttctttgccaatggctaattgacaactgt
ttggaagacatgaaactgatgtcaaaactgatcgacaagaacattttcgatcgcctacgt
ttggtggcatccagttcatttgaaaggatcacatatacaaaagcagttgagcttctgaag
gttgcagagaaaccttttcaatcaaatattgagtggggagtatgcttaactgaagaacat
gagagatatctgtctgatgatgtttacaaaagacccatcattatatgcaatcatccaaaa
gatattaaaccattttatgtgcgtctaaatgatgacaggagaacagtcgcagcaattgat
gttattgtacctaaggttggtgccttgattagaggaagtcaaagggaggagcgttttgat
attatggataagaggattcaagagctgggtttcccaagggatccatatgagtggtatctg
gaccttcggaagcatggcaccgtgaaacacagtggattcagtcttgggtttgagcagatg
gtgctctttgccactggccttgctaatgttagagattcgattccctttccaagattttgt
ggcaaactcggaatggatggagctggagataaaagattttcaattcgtacagtttgttta
cctaatgtttgtaagtaa
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