Amborella trichopoda: 18440542
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Entry
18440542 CDS
T02990
Name
(RefSeq) root phototropism protein 3 isoform X1
Organism
atr
Amborella trichopoda
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPH3
BTB
SANBR_BTB
DUF5841
Motif
Other DBs
NCBI-GeneID:
18440542
NCBI-ProteinID:
XP_020526823
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MMEEGKAHNGRSIVACGSQNRCIMNSSGLGKIAEALEKRGQSWFVYSKFKSDLKIHVADT
CFHVHKLPLICKSGYLSQQVSTHKASHDTEHEVSIDDIPGGAMTFLLVIKFCYGLPLELT
SSNIAPLRCAAEFLEMTELICQGNLISKAEVFFTFLILSSWREPFEVLNYCESISSWAEK
LNIVNRCAEAIAWKACTAPLAPNKLWVTDVLQLRYDHFVTVMKSLRSRNMKESIIGPCLI
RYFNYWVPKAKQNYNEEHRTMLESLIGIMPWKEDSISCEFLLDLLKSSLILGVKESLVED
LVKRVGITLEKCTLDGLIVVSKYDNIKKPRYDLRLMRRIVQHFMMENGFHGSNDPISGSG
NLSAVAVARLIDAYLAEVGSDSSVILNEFKWLAEALPENARSCHDRLYTAIDTYLKAHPS
LTEQQRKMLCLSMDYHKLSMEAKLHAAKNDRLPLRFTLKVLLFEQLNINSSCLMPKVKST
VLTPRKNRLNNQCTSSQELKTIKSELELMNNDVESLRNYSWLQQESNGIKRSSGWGWHTR
RKKTRDTSSITDETSETHVDSLKFPKLHPTLWRWRRNSIS
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagaggggaaggcccataatggtagatcaattgtggcatgtggaagccaaaat
aggtgcattatgaattcttctggtcttgggaagattgcagaagctttagagaagagaggg
caatcttggtttgtgtatagcaaattcaagagtgatctcaagatacatgtggctgataca
tgcttccacgtccacaagcttcctctaatatgcaaaagtggctacttgagccaacaagtt
tctacacacaaagcaagccatgacactgaacatgaagtatcaatcgacgacatcccagga
ggtgccatgacttttttgttggtgataaaattttgctatggactaccccttgagctcact
tcttccaatattgcgcctcttaggtgtgcagccgagttcctagagatgactgagctcatc
tgccaaggaaaccttatctcaaaagcagaagtatttttcacctttctcattctctcttca
tggagggaacccttcgaagtgttaaattattgtgagtctatctcatcttgggctgagaaa
ttgaacatagtgaaccgatgcgccgaagcgatcgcctggaaggcttgcactgcccccttg
gctcccaataagttgtgggtcaccgatgttttgcaacttagatatgatcattttgtgaca
gtgatgaaatccctgagatctagaaacatgaaggaaagtataattgggccatgcttaatt
cggtattttaattattgggtcccaaaagccaaacaaaattacaatgaagaacacaggacc
atgttagaaagtttgataggcataatgccatggaaggaggactccatttcatgtgagttt
ttgttagatcttcttaaatcaagtttaatattgggggtgaaggagtcattagtggaggat
ttggtgaaaagagtggggataacactagagaagtgcacccttgatgggctaatcgtggtt
tcaaaatatgataacatcaagaaaccaagatatgatttgagattaatgaggaggattgtg
caacacttcatgatggagaatggtttccatggatcaaatgatcctataagtgggtctggt
aatttgtctgccgtggcagtggcaaggctcatcgatgcgtacttggctgaggtcgggagt
gattctagtgtgatactcaacgaattcaagtggctcgcagaggcattgccagaaaatgct
aggtcatgccatgatcgtctatacacagccatagatacctatcttaaggcacacccttcc
ttaactgaacaacagagaaagatgctttgcctatccatggactaccacaaattgtctatg
gaggccaagcttcatgctgccaagaatgatcgtctaccactaaggtttacccttaaagtg
cttctctttgagcaactcaacattaatagctcatgtctgatgcctaaggtaaagtccaca
gtacttactccaaggaagaacaggctcaacaaccagtgcacatcttcacaagagctcaaa
acaatcaaatcagagttggagttgatgaacaatgacgttgagagcctaagaaactattca
tggcttcaacaagaatccaatgggataaagaggagtagtggttggggatggcatacaaga
cggaagaaaacaagagacacttcttctattacggatgaaacatcagagacccatgttgat
tctcttaagtttccgaagctgcaccctactttgtggagatggcgaaggaattccatatct
tga
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