Amborella trichopoda: 18442511
Help
Entry
18442511 CDS
T02990
Name
(RefSeq) hydroxyproline O-arabinosyltransferase 1 isoform X1
KO
K20782
hydroxyproline O-arabinosyltransferase [EC:
2.4.2.58
]
Organism
atr
Amborella trichopoda
Pathway
atr00514
Other types of O-glycan biosynthesis
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
18442511
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
atr01003
]
18442511
Enzymes [BR:
atr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.58 hydroxyproline O-arabinosyltransferase
18442511
Glycosyltransferases [BR:
atr01003
]
O-Glycan biosynthesis
O-linked Ara type
18442511
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEPCK_N
Motif
Other DBs
NCBI-GeneID:
18442511
NCBI-ProteinID:
XP_006852789
UniProt:
U5CM99
LinkDB
All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MGSCESLFWSLILTLSTAIITYNIIVSANASLNQELPGTSPSSTSIDPLIRMPVDTRFRN
GGERNKKRLFHTAVTASDSVYNTWQCRIMYYWFKKFKDMEGSEMGGFTRVLHSGKPDAYM
DEIPTFVADPLPAGSDQGYIVLNRPWAFVQWLQKADIKEDYILMSEPDHVIVKPIPNLSR
DGLAAAFPFFYIEPKKYETVLRKFFPEDKGPITNIDPIGNSPVIIEKASLKKIAPTWMNV
SLAMKKDTEADKAFGWVLEMYAYAVASALHDVGNILYKDFMIQPPWDKEVSKKFIIHYTY
GCDYDMNGHLTYGKIGEWRFDKRSYENKPPPRNLTLPPPGVPESVVTLVKMVNEATANIP
NWGVSA
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggggagttgtgagagcctcttctggtctctcatcctcactctctctactgcaatcata
acttacaacatcatagtctctgcaaatgcttctctcaaccaagagctacctggaacctct
ccgtcttcaacttcaattgacccattgatcagaatgcctgttgatactcgctttagaaat
ggaggagagaggaacaaaaagagactattccacactgccgtgactgcatcagacagtgtc
tataacacttggcagtgtaggattatgtattactggttcaagaaattcaaggacatggag
ggctctgagatgggtggatttactagggtgcttcactctgggaagcctgatgcttacatg
gacgagatacccactttcgttgctgacccacttcctgctggctctgatcagggatatata
gttcttaatagaccatgggcatttgttcaatggcttcagaaggcagacatcaaagaagac
tacatactaatgtcagagccagaccatgtaattgtcaaacctatacccaatctttcaaga
gatgggcttgcagctgcatttcctttcttttatatagagccaaagaaatacgaaactgtg
ttgaggaagttcttccctgaagacaaaggccccatcacaaatatcgatcctatagggaat
tcccctgttattatagaaaaggcatctcttaagaagattgctccaacatggatgaatgtt
tccttggcgatgaagaaggatacagaagctgataaagcctttggatgggttcttgagatg
tatgcttatgctgttgcatctgccttgcatgatgtgggtaatatcctttacaaggatttc
atgattcagcctccttgggacaaagaagttagcaagaagttcattatacattatacatat
gggtgtgactatgatatgaacggtcacttaacatatggaaagattggggagtggaggttt
gacaaaagatcatatgagaataaaccacctccaagaaacctaacactgccaccacctgga
gttcctgaaagtgtggtgaccctagtgaaaatggtgaatgaagcaacagcaaatattcct
aactggggagtgtctgcctaa
DBGET
integrated database retrieval system
