Amborella trichopoda: 18445622
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Entry
18445622 CDS
T02990
Name
(RefSeq) ras-related protein RHN1
KO
K07889
Ras-related protein Rab-5C
Organism
atr
Amborella trichopoda
Pathway
atr04144
Endocytosis
atr04145
Phagosome
atr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
atr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
18445622
04145 Phagosome
18445622
04148 Efferocytosis
18445622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atr04131
]
18445622
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atr04147
]
18445622
04031 GTP-binding proteins [BR:
atr04031
]
18445622
Membrane trafficking [BR:
atr04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
18445622
Endosome - Lysosome transport
18445622
Exosome [BR:
atr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
18445622
Exosomal proteins of other body fluids (saliva and urine)
18445622
Exosomal proteins of colorectal cancer cells
18445622
Exosomal proteins of bladder cancer cells
18445622
GTP-binding proteins [BR:
atr04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
18445622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
ATPase
AAA_16
TsaE
ABC_tran
Motif
Other DBs
NCBI-GeneID:
18445622
NCBI-ProteinID:
XP_006855565
LinkDB
All DBs
Position
Unknown
AA seq
200 aa
AA seq
DB search
MASVGNNNLNAKLVLLGDMGAGKSSLVLRFVKGQFMEFQESTIGAAFFSQTLAVNETTVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNMDSFARAKKWVQELQRQGNPSMVMAL
AGNKADLEEKRKVTPEEAKSYAEENGLFFMETSAKTAINVNDIFYEIAKRLPRAQPAQNP
TGMVLVDRPAERARTAACCS
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgtgggcaacaataatctgaacgctaagctcgttcttctcggggatatgggt
gcaggcaaatcaagcctggtcttacggttcgtcaaaggacaattcatggaattccaggaa
tcgacaattggggcagcgttcttctctcaaactttggctgttaatgaaactactgtaaaa
tttgagatatgggacacagctggtcaggaaaggtatcatagtttggcacccatgtattat
agaggagctgctgctgccataattgtctatgatatcactaacatggattcctttgcacga
gcaaagaaatgggtgcaagaacttcaaagacaaggtaacccaagcatggtaatggcactt
gctgggaataaagctgatctagaagagaaaagaaaggttacaccagaggaagccaaatcg
tatgctgaggagaatgggcttttcttcatggaaacctctgctaagactgctattaatgtg
aatgacatattttatgaaatagcaaaaaggttacctcgagcccagcctgcacagaatcca
acaggaatggttcttgtggatagaccagcagagcgtgcaagaactgctgcctgttgttcc
tag
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integrated database retrieval system