KEGG   Aegilops tauschii (wheat D): 109747652
Entry
109747652         CDS       T04345                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 1
  KO
K16251  DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109747652
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ats03021]
    109747652
Enzymes [BR:ats01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     109747652
Transcription machinery [BR:ats03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     109747652
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_5
Other DBs
NCBI-GeneID: 109747652
NCBI-ProteinID: XP_020162274
LinkDB
Position
Unknown
AA seq 1947 aa
MEEEDQSAVLVAEGAIKSIKLSLSTEEEICTYSINDCPVTHPSQLGNPFLGLPLETGKCE
SCGATENGKCEGHFGFIELPVPVYHPCHVSELRQLLSMVCLMCLRIKKGKVKQKNGKENV
SVTACHYCRGLPALYLKEIKTEDGAFRLELRAPPKKHMTERSWDFLNKYGEFHHGGASHC
RTLLPVEAFNILKKIPDDTKKKLAARGFIAQPGYVMKYLPVPPNCLYIPEFTDGQSIMSY
DISISLLKKILQKIEQIKKSRSGSPNFESHDSESADLQLSIGQYIQLRGTTKGPQDAKRF
AVSTDSSHLSTKQWLEKMKTLFISKGSGFSSRSVLTGDPYIGADVVGLPSEVAKRITFEE
QVTDININRLQEVVDKGLCLTYRDGQTTYAITVGSKGYTTLKVGQTISRRIVDGDVVFLN
RPPSTHKHSLQAFTVYIHDDHTVKINPLICSPLAADFDGDCVHIYYPQSLAAKAEALELF
SVEKQLTNSHNGKVNLQLANDSLLALKHMSSRTMLSKESANQLAMLLSLSLPPPAVVKSK
PCWTIAQIMQSALPAELTCEGDRFLVRDSTVIKLDIDKESVQASFSDLVSSILAVKGPGD
ALKFLNALQPLLMEFLLLDGFSVSLQDFSVPKPLLEEAQECIKKQSLVLEQSRCSSSQSV
ETRVDNNLKDVKQQIADFVVKSSRLGLLIDPKSDSSVSKVVQQLAFVGPQLYREGKFYSR
RLVDDCFSSFVNRHPPIEDGVQHPPEAYGLVQSAYFHGLNPYEELVHSICTRETIVRSSR
GLTEPGTLFKSLMAILRDVVICYDGTVRNICSNSIMQLKYKEEDDTDFPSAIAPGEPVGV
LAATAISNPAYKTVLDSSQSNNTSWELMKEILKTKVSYKNDAKDRKVILFLNDCSCPKKF
CKEKAAIAVQGCLKRVTLEDCATDICIEYKKQVSLDAISEATPAFVGHIHLEKAHLEKIN
VSTDEILQKCQEVSGKHANKKGTLGHLFKKITFSTCDCSFAQKPGDGKVPCLQFSFSEDI
PMLSDSVEKAVNVLADSLCGVLLEIIIKGDPRVQEAKITWVGSDATSWVKHTKKISKGEP
AVEIIVEKKEAMQNGDAWRIAMDACIPVMNLIDTQRSIPYGIQQVRELLGISCSFDQVVQ
RLSKTMKTVAKGILKDHLVLVANSMTCTGNLNGFHNGGYRATFRSLKVQVPFTEATLLTP
MKCFEKAAEKCHSDSLGSVVSSCSWGKHAALGTGSSFQILWNENQLKSNKEYGDGLYDFL
ALVRTDQEKAAYTFLDDVDYLVEDNAMDDICLSPEMDGTHGMPTFEDDPEQQNTEKDSSW
ENGTTAGASWERNANAGNDSGNWGGGSTVENDSTDWAGWGTGPANDKKIVSGEPAEPDTW
ADQGAKKDTEGGWNNAAAAADTGAAKPAEQDKSCWNAPPAVENDSSGWGGWGTGNAKDKN
IASEGSAEVDTWADQSGKRDTDGGGANWDKMKVKDHNMQQDQWGHVPSQNVDAQDDPWGS
VAGVAQPSTAKHIDAQNDSWGSVAAKAQTSTAEPMDAGNGSWGSVAAKAQTYTAQQESWG
NVSASPSDNAWGAAPVSQGPDNSDAKQPDSWDGWGSAAPVSQGPDNSDAKQPDSWDGWGS
AAPVSQGDNSDAKQPDSWDGWGSAQADDSSTDKWKTNASGNNKGWKSDGWEAKENRRDQR
DNPGRPPIRPPVERPPRPRYELPAEAKKVLQEIEPIVTMVRKIFRESSDGIRLPLEDEKF
IIEKVLEHHPEKEKKVSGEIDHIMVNKHHVFQDSRCFYVVSSDGTQTDFSYIKCMDNYVR
KNHEEHAELICEMHFKKRNRDRPPTVDGAAAPATEAGASQPAPGEDLEAALPGPPPGTPP
PTAITQHETPASPAAAPEDDLPLPPPPPLTQHEDGTPEDDLPLPPPPPLPQQEAGTPGSA
AAAGAVDDKWAGAGDDKWAGGADDKWV
NT seq 5844 nt   +upstreamnt  +downstreamnt
atggaggaggaggaccaatcggcagtgctggtcgctgaaggtgccatcaagagcataaag
ctcagcctctccaccgaggaggagatatgtacctactctataaatgactgtcctgttact
catcctagtcagcttgggaatcctttccttggcttaccactggaaacaggcaaatgcgag
tcatgtggtgccacggaaaacggcaaatgcgaagggcatttcgggttcattgagctgcct
gtacctgtatatcacccgtgtcatgtcagtgagcttaggcaactactgagcatggtatgt
ctgatgtgccttcgtatcaagaaaggaaaggttaaacagaagaatggaaaggaaaatgtg
tcggtaacggcatgtcattactgtcggggtctcccggcactatatctgaaggaaatcaag
acagaagatggtgcatttcgtttagagttgagagcacccccaaagaaacacatgacagaa
cgctcttgggacttcctaaacaaatatggggagtttcaccatggtggagcctctcactgt
aggacattgcttccagtagaggcttttaatatattaaagaagattccggatgacacgaaa
aaaaagctagctgcacggggattcattgctcagcctggatatgtaatgaaatatcttcca
gtgccacctaactgcctctatattccagaattcacagacgggcagagcatcatgtcctat
gacatctctatatctttgttgaaaaagatacttcaaaagatagagcaaataaaaaaatca
agatctggttccccaaactttgagtcacatgattctgaatcagctgatctgcaactttct
attggccaatatatacagctcaggggaactacaaagggtcctcaagacgcaaagagattt
gcagttagcacagattcatctcatttgtcaacaaagcaatggctcgaaaagatgaaaaca
ctttttatcagcaaaggatcaggattttcatcacgcagtgtacttactggagacccgtat
attggagcagatgtagttggactgccttctgaagtggcaaaaagaattacttttgaagaa
caggttacagatatcaacataaatagattgcaagaggttgttgacaagggattgtgtttg
acttatagagatggtcaaacaacatatgcaatcactgtaggatcaaaaggatataccact
cttaaagtgggtcaaacgatcagtagaagaatcgttgatggtgatgttgtgttccttaac
aggccacctagtactcacaagcattctctccaggcatttactgtatacatccacgatgat
cataccgtcaaaatcaacccccttatatgctctcctcttgcagcagattttgatggtgat
tgtgtgcatatttattatcctcagtcacttgctgctaaagcggaagcattggaacttttc
agtgtggagaagcaactgactaactcacacaacggaaaagtaaatctccagctagcgaat
gacagcttgcttgctctgaagcacatgtcttctagaaccatgttaagcaaagaatcagca
aaccagctggcaatgctcctgtcgctttctcttcctccccctgctgtggtcaagtctaag
ccatgctggacaatcgcacaaataatgcaaagtgcgttgccagcagaattgacttgtgaa
ggggatagattcctagttagggacagcactgttataaaactggatattgacaaagaatcc
gttcaggcctcgttttcggacttggtgtcctccattcttgctgttaagggaccaggagat
gcgctcaagtttttgaatgcgctgcaaccccttctgatggaattcttgcttctggatggc
tttagtgtaagcctgcaagattttagtgtacccaagcctttgttggaagaagcacaggag
tgtattaaaaagcagtctcttgtactggagcagtcaaggtgctcgagtagccagtctgtg
gaaacaagagttgacaacaatctgaaggatgtcaaacaacaaattgcagattttgtcgtg
aaatcctctcgtcttggtcttctaattgacccaaagagtgactcttcagtgtcaaaagtt
gttcaacagcttgcttttgttggtccgcagctctaccgcgaggggaagttctattcaagg
cgtctggtggacgattgcttctcaagttttgtcaatagacacccaccgattgaagatgga
gttcaacacccaccagaggcgtatggtcttgtgcaaagtgcatattttcatggtctcaat
ccttatgaggagctagtacattctatatgtacaagagaaactattgtccgctcctcaaga
gggttgacagaaccaggaactctgttcaagagtctaatggccatcttgcgagacgtagtt
atatgctatgatggaactgtgagaaacatctgcagcaattcaatcatgcagctgaagtac
aaagaagaagatgacacagattttccaagtgctatagctcctggagaaccggtgggtgtc
ttagctgccactgctatctccaaccctgcttataagactgtcttggactcttctcagagt
aataatacttcatgggagttgatgaaggaaatacttaagacaaaagttagctataaaaat
gatgcgaaggatcgaaaagttatcctgttcctgaatgactgctcttgccccaagaaattt
tgcaaagagaaggctgctattgcagtgcagggttgcctaaagagagtcacactagaggat
tgtgccactgacatctgcatcgagtataagaaacaagttagtttagatgcaatttcagaa
gccacgccagcatttgttggccatattcatcttgaaaaggcacatttagaaaagataaac
gttagcactgatgagattcttcagaaatgccaagaagtttctgggaaacatgccaataag
aaaggaactcttggtcacctgtttaaaaagattactttctctacttgtgattgttcattt
gcgcagaagccgggtgatgggaaggttccatgtttgcagttctctttttctgaggacatc
cctatgttatctgattccgttgagaaagcagtgaatgtgttagccgattctctctgtggt
gtgcttctggagataatcataaaaggtgatcctcgagttcaagaggctaaaattacgtgg
gttgggtctgatgcaacgtcttgggttaaacatacaaagaagatatcaaagggtgagcca
gcagtagaaattattgttgagaaaaaggaagctatgcagaacggtgatgcatggagaatt
gccatggatgcatgtataccagtcatgaacctcattgacacacaaaggtcaattccttat
ggtattcagcaagtgcgagaacttcttggcatatcatgctcctttgatcaagttgttcag
cgcctttcgaaaaccatgaagacggttgctaaaggaattctgaaggaccatttggttctt
gtggcaaacagcatgacatgcactgggaacttgaatgggttccacaatggtggttacagg
gcgacctttcgttcattaaaagttcaagtaccttttacagaggccaccttgcttacccct
atgaaatgcttcgagaaggctgctgagaaatgccattctgattcattgggttctgtggtc
tcatcctgttcgtggggcaagcatgcagcacttggtactgggtcatcttttcagattctt
tggaacgaaaatcagctgaaaagcaacaaggaatatggtgatggcctgtatgatttcctg
gccttggtgaggaccgaccaagaaaaggctgcttacacattcttggatgatgtggactac
cttgttgaagacaacgcaatggatgatatttgcttatcaccagaaatggatgggacccat
ggtatgcccacttttgaagatgatcctgaacagcaaaatactgagaaggacagctcatgg
gaaaatggcacaacggcgggtgcaagctgggaacgaaatgcaaatgctgggaatgattct
ggtaactggggaggaggctcaacagtggagaatgattccactgattgggcaggctggggc
actggacctgcaaatgacaaaaagattgtatccggagaaccagctgaacccgacacttgg
gctgaccagggtgctaaaaaggatacggaaggaggctggaataatgcagctgcagctgct
gacacaggagctgcaaaaccagcagagcaagacaagtcatgttggaatgcgcccccagca
gtggagaatgattcctctggttggggaggctggggcactggaaacgcaaaggacaaaaat
attgcatctgaaggatcagctgaagtcgatacttgggctgatcagagtggtaaaagggat
actgatggaggtggtgctaactgggacaaaatgaaagtgaaggatcacaatatgcagcaa
gaccaatggggtcatgtgccatcccagaatgttgatgcacaggatgatccatgggggagt
gtagcaggtgtggctcaaccttctaccgcaaagcatattgatgcacagaatgattcctgg
gggagcgtggcagcgaaagctcaaacttctactgcagagcctatggacgcagggaatggt
tcctgggggagtgtggcagcgaaggctcagacttatactgcacagcaggagtcctggggt
aatgtgtctgcttcaccatcagataatgcgtggggtgctgctccagtttcccagggacct
gataactcggatgcaaagcagccagattcttgggatggctggggttctgctgctccagtt
tcccagggacctgataactcggatgcaaagcagccagattcttgggatggctggggttct
gctgctccagtttcccagggagataattcagatgcaaagcagccagattcttgggatggc
tggggttctgctcaagccgatgactcgagtactgataaatggaagaccaatgcttctggc
aacaacaaaggctggaaatcagatggatgggaggccaaagaaaaccggagggaccaaaga
gacaatccaggcaggcctccaataagacctcctgttgagaggccaccaaggccacggtac
gaactgccagctgaggcgaaaaaggttctacaagaaattgaacccattgtaacaatggtc
agaaagatcttccgtgaatcaagtgatggcataaggcttcccctggaggacgaaaagttt
atcatagaaaaagttctggagcaccaccctgaaaaggaaaagaaggtgtctggtgaaatt
gatcatataatggtcaacaagcaccacgttttccaggacagccggtgcttctatgttgtg
tcatcagatgggacccaaacagacttctcctacatcaagtgcatggacaactacgtgagg
aagaaccacgaggagcacgccgagctcatctgcgagatgcacttcaagaagcgcaaccgc
gatcgaccaccaacggtcgacggagccgcggcaccagccactgaagccggggcgtctcag
ccggctccgggtgaggacttggaagccgctctgccaggcccaccgccaggaactccacct
cctacagcgatcacccagcacgagactccagcttctccggctgcggctccagaagatgat
ctgcctctgcctcctccccctccactgacccagcatgaggatggaacgccagaagatgat
ctgccgctgcctcctcctcctccactgccccagcaggaggctggaacgccaggttcagcg
gcagcggcaggagccgtcgatgacaagtgggcaggggccggcgatgacaagtgggcggga
ggcgccgatgacaagtgggtctag

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