Aegilops tauschii (wheat D): 109771913
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Entry
109771913 CDS
T04345
Name
(RefSeq) pre-mRNA-processing factor 19 isoform X1
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03040
Spliceosome
ats04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109771913
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109771913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ats03041
]
109771913
04121 Ubiquitin system [BR:
ats04121
]
109771913
03400 DNA repair and recombination proteins [BR:
ats03400
]
109771913
Enzymes [BR:
ats01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109771913
Spliceosome [BR:
ats03041
]
Complex B
Other components
Prp19 complex
109771913
Complex C
Prp19-CDC5 complex
109771913
Ubiquitin system [BR:
ats04121
]
Ubiquitin ligases (E3)
U-box type E3
109771913
DNA repair and recombination proteins [BR:
ats03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
109771913
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Prp19
ANAPC4_WD40
eIF2A
NBCH_WD40
U-box
zf-Nse
PAN2_N
PAS_11
Motif
Other DBs
NCBI-GeneID:
109771913
NCBI-ProteinID:
XP_020186195
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MICASKLLCLSPPSFIFFKTLATRSVSPCANSSSVASTFGPEVSGEVPDEPVVSKRSGLL
FERRLIERYIEDHGKCPVTKEELSMDDIVLVKTNKVVRPRPLQAASIPGLLGIFQNEWDA
LMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDESRALLALAERQIPASMAG
VAPAAVVSNGKRAMEDEIGPDGKKIRPGINPVMIDELTECNTMLSAQRKKRQVPPSLASI
DELERYTQISSHPLHKTNKPGILSMDIHPSKDIVATGGIDTNAVLFDRTSGQILCTLAGH
SKKITTLKFVPRDELVVTGSADKTVRIWQGGEEGNYSCIHTLKDHTAEVEAVTVHATQKY
FVTAAKDNTWCFYDISTGSCLSQVGEASGQEGYTSASFHPDGLILGTGTTEAVVKIWDVK
TQSNVAKFEGHAGPVTAMSFSENGYFLATAALDGVKLWDLRKLRNFRTFSPYDSDTPTNS
VEFDFSGTYLAVAGSDIRVYQVANVKTEWNLIKTLPDLSGTGKVTSAKFGTDAKYIAVGS
MDRNLRIFGPPGDDQMDDDAKPSAE
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgatctgtgcaagtaagctcctttgcctcagccccccatcctttattttcttcaaaacc
ctagctacccgatccgtctccccgtgcgctaattcgtcttccgtggcctctacgtttggg
cctgaagtctccggcgaggtgccggatgagccggtggtatcaaagaggtcggggctcctc
tttgagcggcggctcatcgagcgctacattgaggaccatggaaagtgtccagttacgaag
gaggaactctccatggacgacatcgtgctggtgaagaccaacaaggtcgtgaggcccagg
cctctgcaggctgcaagcattcccggactccttggaatctttcaaaacgagtgggatgct
cttatgctttctaattttgctttggagcagcagcttcacacagcaagacaagaacttagt
catgcgttataccagcatgatgctgcctgccgtgttatagccagattaaagaaggaaaga
gatgagtctagagcacttttggctctagctgagagacagattcccgcttcgatggcagga
gttgcacctgcagctgttgtttccaatggaaaaagagcaatggaggatgaaattggccct
gatgggaagaagatacgccctggtatcaatcctgtcatgatcgatgaactaacagagtgt
aataccatgctttctgcccagcgtaagaaacgacaggtaccaccaagtttggcatcaatt
gatgaactggagagatatactcagatctctagtcatccactccacaagacaaacaagccg
ggcattttgtctatggatatccatccgtcaaaggacatagttgcaactgggggtattgat
acgaatgcagtgctatttgataggacatctggtcaaatcctgtgtacacttgctggtcac
tccaagaagataaccactttgaaatttgttccacgggatgagctcgtggtaactggatca
gcagataagactgttcggatttggcaagggggtgaggagggaaactatagttgcatccat
actttgaaagatcataccgctgaggtcgaagctgttactgtgcatgcgactcagaagtac
tttgtgaccgcggccaaggataatacttggtgcttctatgatatttcaactgggtcttgc
ctctcacaggttggcgaggcttcaggacaagagggatatacatctgcgtctttccaccca
gatggtcttatccttggaacaggaactactgaagctgttgtcaaaatttgggatgtgaaa
actcagtccaatgttgcaaagtttgaggggcatgctggacctgtcactgctatgtccttc
tctgaaaatggttacttcctggcgactgctgctcttgatggtgtcaagctttgggatcta
aggaaattgagaaattttaggactttctcgccatatgattcggatacgccgacaaattct
gtggaatttgattttagcggtacctatcttgctgttgctggttcagatataagggtttac
caagtagccaacgtcaagacggaatggaatcttatcaagaccttgccagatttgtcagga
acagggaaagtgacctctgcgaagtttggcactgatgccaaatatatcgccgtcggctct
atggaccgtaacctgaggatatttgggcctcctggagatgatcaaatggatgatgatgca
aaaccatcggccgagtga
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integrated database retrieval system
