Aegilops tauschii (wheat D): 109784851
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Entry
109784851 CDS
T04345
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K06236
collagen type I alpha
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109784851
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ats00536
]
109784851
Glycosaminoglycan binding proteins [BR:
ats00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109784851
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Linker_histone
Motif
Other DBs
NCBI-GeneID:
109784851
NCBI-ProteinID:
XP_020199045
LinkDB
All DBs
Position
Unknown
AA seq
1124 aa
AA seq
DB search
MGVASPSPPPPAANQARPPDPPTPTPPPPPVPTLTPTGGGGGMAVAPPSSPPPAAAAAGS
PNPTSTEGQGKMVVASPSTAPPTADADADADGSPHPTYPEMIKQALTELGGTSGRIAIAA
FILGRFKEGLPAAHDKLLKVHLRRLVSQGVVRGYGSEARACYVFPASNTKSRGRPRKSSS
RLLLTASPTLPLPLPAPPTNEDDQNLDLSLDTSSGGLRSRRGRPLFPALPAPKNLSDLSL
VPQSGGSQISSDDDDDYSTSSDDDDDEDDEEDDYSSGDDNDDEYTPARAYALIVHGAKRG
RPRKRKRKRGPGRPRKLLLSANSSVTKKGRGRPRKKQKLGSSLAAFQNGTPGGGFSTPKR
GRGRPRKDAQGLSTRVKRGRGRPRKDAQGLSTGVKKGRGRPRKESEGMSTGVKSGRGRPR
KEPEDGVPEADSSETESDAESDSSLTGSDTESGSPDVSRWLKEGFGNPTTIATPPAAVRP
ASRGLNIGSLRPTIERPPAAASSPGTLVYSAASTGMKKPLGRPRKKGSSKAPAEAGGGAS
TGIKKPRGRPRKERPPQAMSAEAGDAAAPAPETGNATLASETGDAAAPAPEAGDAPPALE
TGDATPAPEAGDAVPTPETGGVAPASETRDAAVSAPEAGDASPAPDENAAATPAKTGDGA
SAGIKRPRGRPRKERPPAPTSTETGDAAPDENGAATPAEAGDAASTGFKKPRGRPRKEKQ
PASISAETGDATPAGTGDAETGDVTPTETGGATPAEGGNAASTGIKRPLGRPRKVKKLGR
PRKEKPEEAAMSGETGDDAGDARSAETGAATPGEKAGDSASAGVKRGRGRPRKERPEEAI
SAESGDAETETERKKAKVARSAGDGGIKRGLGRPRKIKRGRPKKEKPASDDAMSTGIKGP
LESPRSYYALSAGTGKAVSMGSKIALESPRTAEKPSAGDIVSMVMRRRRAMPRSSDQPSE
AGRVKSSGGIFGYVRESSGKQEKEGSLASSGEGEKTPQAKEGVVAALGGGEETGLTADAP
VSAEKAIAGDAAVVEGTGGVTEASSDKLGSCATSEKSTSGPRHVEAVGGATESSSNKLGR
AGAVAENAEAENVEKVESDKKPRVEGEGEGGEDKLGSAERCVVS
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgggggtcgcctctccctcgccgccgccgcccgccgccaaccaagctcggccgccggat
ccaccaacccccaccccaccccctcctcctgttccaacccttaccccaacaggaggagga
ggaggcatggcggtcgccccaccttcgtcgccgcctcccgctgccgccgccgccggcagc
ccgaaccctacctccaccgagggccaaggaaagatggtggtcgcctctccttccacggcg
ccgccgaccgccgacgccgacgccgacgccgacggcagcccgcacccgacctaccccgag
atgattaagcaggcgctgacggagctgggaggcacctccggccgcatcgccatcgccgct
ttcatcctcggccgcttcaaggagggcctccccgccgcccacgacaagctcctcaaggtc
cacctccgccgcctcgtctcccaaggcgtcgtccgcggctacggatcagaagccagagct
tgctacgtcttccccgcctccaacaccaaaagccgcggccggccccgcaagtcgtcgtcc
cgtctcctcctcaccgcgtcgccgaccctgcccctccccctccctgcgccgcccaccaac
gaggacgaccaaaatttggatctcagtttggatacatcttctggaggattacggagcaga
cgtggccggcccctctttccggcactccctgcgcccaagaatttgtcggatctcagtttg
gttcctcaatctggagggtcacagattagcagtgatgatgatgatgattactccacttcc
agtgatgatgatgatgatgaagatgatgaagaagatgactacagcagtggtgatgacaac
gatgatgaatacactcctgcccgtgcatatgctttgatcgtccatggagcaaagcgcgga
cgcccacgcaagcgcaagcgcaagagggggccaggccgtcctcgtaagcttctgctgtcc
gcgaattcctcagtcaccaagaaaggccgtgggaggccaaggaagaagcagaaacttggc
tcctcactggctgcttttcagaatggaaccccaggaggtggtttctcgacgcccaagaga
gggcgtgggaggccgcgaaaggatgcacaagggctgtcaacacgtgtcaagagaggccgt
gggagaccaagaaaggatgcacaagggctgtcaaccggtgtcaagaaaggccgtggcaga
cccagaaaggagtcagaaggaatgtcaacgggtgtcaagagtggccgtgggaggccgaga
aaggagccagaagatggtgtcccagaagcagactcttctgaaactgaatcagacgcagag
tcagactcttctctaactgggtcagacactgagtcaggctctccagatgtgtcgaggtgg
ttgaaggaagggtttgggaatccaacaacaatagcgacgccgccagcagcagttaggcct
gcgtccagggggctcaatatagggtctctgaggccaacaatagagaggccaccagcagca
gcaagctcccctggaactcttgtttactctgctgcgtccacgggaatgaagaaaccgctt
gggaggccaagaaagaagggatcatcaaaagcgcctgctgaggctggaggtggtgcgtcc
acggggatcaagaaaccgcgtgggagaccgagaaaggagagaccaccacaagcaatgtct
gctgaagctggagatgcagcagcacctgctcctgaaactggaaatgcgacgcttgcttct
gaaactggagatgcagcagcgcctgctcctgaagctggagatgcaccgcctgctcttgaa
accggagatgcaactcctgctcctgaagctggagatgcagtgcctacccctgaaactgga
ggtgtggcccctgcttctgaaactagagatgcagcagtatctgctcctgaagctggagat
gcatcgcctgctcctgatgaaaatgcagcagcaacgcctgccaaaactggagatggtgcg
tcggcggggatcaagaggccgcgtgggaggccgagaaaggagagaccgccagcaccaacg
tctacagaaactggagatgcagcgcctgatgaaaatggagcagcaacgcctgctgaagct
ggagatgctgcttcaaccggattcaagaaaccgcgtgggaggccgagaaaggagaaacaa
cctgcatcaatctctgctgaaactggagatgcaacccctgctgggactggtgatgctgaa
actggagatgtaacccctactgaaactggaggagcaacgcctgctgaaggtggaaatgct
gcatcgacagggatcaagagaccgcttggaaggcctagaaaggtgaagaagcttgggagg
ccaagaaaggagaagccagaagaagcagcaatgtctggtgaaactggagatgatgctgga
gatgcaaggtctgctgaaactggagcagcaacgcccggtgaaaaagctggagattctgcg
tcggcgggggtcaagagagggcgtgggaggccaagaaaggagaggccagaggaagcgatt
tctgctgaaagtggagatgccgaaacagaaacagaaaggaagaaggcaaaagtagcaagg
tcagctggagatggtgggatcaagagagggctcgggaggccgagaaagatcaagcgcggg
aggcccaaaaaggagaagccagcatcagacgacgccatgtcaacgggaatcaagggaccg
ctcgagtccccaagatcatactatgcattatctgctggaactggaaaagccgtgtcaatg
ggaagcaagattgcgctggagagcccaaggacggcggagaagccgtcggcaggcgacatc
gtgtcgatggtgatgaggagaaggcgtgcgatgcccaggagcagcgaccagccctctgaa
gctgggcgcgtgaaatcctctggcgggatttttggatacgtgcgagaatccagtggtaaa
caagagaaggagggcagtctggcatcatcaggggagggggagaaaacaccacaggccaag
gaaggtgtggtggctgctttgggtggcggtgaggaaactgggcttactgcagatgcgccg
gtttctgcagagaaggcaatagcgggtgatgccgctgtcgttgagggaactggaggtgtg
actgaagcttcttctgataagctgggttcttgtgccacttcagagaagtcaacgagtggt
cctcggcatgtggaggctgttggaggcgcgacagaatcttcatctaataagctggggcgt
gcaggtgcagtagcagagaatgcagaagcagagaatgtggagaaggttgaatctgataag
aagcctcgtgtggagggggagggggagggtggagaagacaagctgggatctgcagaaaga
tgtgtggttagttga
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integrated database retrieval system