Acinetobacter sp. TTH0-4: AMQ28_08575
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Entry
AMQ28_08575 CDS
T04075
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
att
Acinetobacter sp. TTH0-4
Pathway
att03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
att00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AMQ28_08575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
att03400
]
AMQ28_08575
Enzymes [BR:
att01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AMQ28_08575
DNA repair and recombination proteins [BR:
att03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AMQ28_08575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
MetallophosN
KNOX2
Motif
Other DBs
NCBI-ProteinID:
ALD02405
UniProt:
A0A0M4GK27
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All DBs
Position
complement(1814547..1815371)
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AA seq
274 aa
AA seq
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MIPKSSYPSDQKILRVVSINVNGLRSSVTKGLLEWIEQSEADVVCMQESRITHAQWTDKF
KPEGWYTHLFPAERAGYAGTAIYSRLPFVSVTDGLGFELADSQGRFIRAEFDLGLDKTVH
ICSLYLPSGSSGDEAQARKDHFLEQYQAILKQWRDEDKSIIVCGDYNIVHKRIDIKNWSG
NQKSSGCLPHERAWLDHIYDELGYVDTFREVRKEAEVYSWWSNRGQARAKNVGWRIDYQA
CSPDWKARTVNAWVYKDSWFSDHAPVIIDYQFPI
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgataccaaagagtagctatccaagtgatcaaaaaattttaagagttgtttccattaat
gtgaatggcttacgttcttctgtgacgaaaggcttactagaatggatagaacagtccgaa
gccgatgtggtttgcatgcaggaaagtcgaattacccatgcacagtggacagataaattt
aaacctgaaggctggtatacccatttatttccagctgaacgtgcaggttatgcaggcaca
gccatttatagccgtttaccctttgtgtcagttaccgatggcttaggatttgaacttgca
gattctcaaggccgttttatacgtgctgaattcgatctcggtttagacaaaactgtccat
atttgttcactgtatttaccttcaggttcttctggtgatgaagcacaggcacgtaaagac
cactttttagaacaatatcaagccatcttaaaacaatggcgtgacgaagataaatcgatc
attgtttgtggtgactacaatatcgtacacaaacggattgatattaaaaactggtcgggt
aaccaaaagtcttcaggttgtttaccacatgaacgtgcatggctcgatcatatttatgat
gaattgggttatgtagacactttccgagaagtacgaaaagaagccgaagtctattcatgg
tggtcaaatcgcggtcaagcaagagctaaaaatgtcggttggcggattgattaccaagcg
tgttcaccagactggaaagcccgtacagtcaatgcttgggtttataaagacagttggttt
agtgaccatgcaccggtgattattgattatcaatttccaatataa
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