Agrobacterium fabrum: Atu0608
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Entry
Atu0608 CDS
T00070
Name
(GenBank) transcriptional regulator
KO
K07110
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
atu
Agrobacterium fabrum
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atu03000
]
Atu0608
Transcription factors [BR:
atu03000
]
Prokaryotic type
Helix-turn-helix
XRE family
Atu0608
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ScfRs
Peptidase_M78
HTH_3
HTH_31
HTH_19
Motif
Other DBs
NCBI-ProteinID:
AAK86419
UniProt:
A9CK52
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Position
circular:594823..596238
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AA seq
471 aa
AA seq
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MSENKIFAGPRVRRIRNGLALTQTAMAEALAISPSYLNLIERNQRPLTVQLLLKLASVYK
VDLDDLQGESAGSAGQLREVFADPLLVGEVPSPQELIEVADAAPNAASGVLKLYRAYREQ
AQRLSDLSDLLAREGHETALSSTRLPIDEVRHVFENRPAYFHAIDAAAEELHKQLSTGDD
LASGLRAWLQKNHGIVVRTLPVHAMPNLRRRYDRHSMRLFLSERLSQPDQLREMAMETCL
LALREEIGTELEALGLKGEEARRIARFELARYAAHALMMPYGAFLAAAQRAKYDLDVLRS
RFNVSFEQAANRLVSLQRPTTAAIPFFLMEIDNAGNRFRLAGAGGFPRARFGGLCPRLNI
HAAFAQPGQVLVESVEMPDGDAFLTVSRTLEGPQAGFGERVRRTAVLLGCDLGQAGETVY
GPAASGAAPVAIGPSCRLCERQGCLSRAEAPLTRPLGLDEMVTGLSVFDFQ
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggaaaacaagatttttgccgggccgcgcgtgcgccgtattcgtaacggtctcgca
ttgacgcagacggccatggccgaggcgctggcgatctcgccgtcttacctcaacctcatc
gagcgcaaccagcggccgctgaccgtgcaactgcttttgaagctcgcctcggtctacaag
gtcgatctggacgaccttcagggcgaaagcgccggttccgccgggcagttgcgtgaggtc
tttgccgatccgctgctggtgggtgaggtgccatcaccgcaggaactgatcgaggttgcc
gatgccgcgcccaatgcggcaagcggtgtcctcaagctttaccgggcctatcgggaacag
gcgcagcgcctttccgacctctccgatcttctggcgcgggaagggcatgagacggcgctg
tcctccacccgtctgccgatcgacgaggtgcggcacgtctttgaaaaccggccggcttat
ttccatgccatcgatgcggcagcagaagaactgcataaacaattatcgacgggcgatgat
ctcgcctcgggtttgcgcgcctggctacagaaaaatcatggcatcgtcgtcagaaccctg
ccggtgcacgccatgccgaatctgagacggcgttatgatcgccattccatgcggctgttt
ttgtccgagcgcctctcccagccggatcaactccgggaaatggcgatggagacctgtctt
ctggcgcttcgcgaagagatagggacggaactggaggcgctgggcctgaaaggcgaggag
gcgcggcgcatcgcccgtttcgaactggcacgttatgccgcccatgcgctgatgatgccc
tatggtgcgttccttgccgccgcccagcgcgcgaaatatgacctcgatgttctgcggtcg
cgcttcaacgtctcgttcgaacaggccgccaaccggctcgtcagcctgcaacggccaacg
accgcggcgatcccgtttttcctgatggagatcgacaatgccggcaaccgtttccgcctc
gcaggggcgggcggtttcccgagggcgcgattcggcggtctctgtccgcggctcaatatc
catgccgccttcgcccagccggggcaggtgctggtggaatcggtggaaatgcctgacggt
gatgctttcctcaccgtttcgcgcacgctggaaggtccgcaggcgggtttcggcgaaagg
gtgaggcgcacggccgtgcttttaggctgcgatctcggccaggcgggggaaacggtctat
ggcccggccgcctctggtgctgcacccgtcgccatcggcccctcgtgccggctgtgcgaa
agacagggctgcctgtcacgggccgaagcgccgctcacgcgcccgctcgggttggatgaa
atggtcaccggccttagtgttttcgacttccagtag
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